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13_1_20cm_full_scaffold_19023_10

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 7812..8579

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7E9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 239.0
  • Bit_score: 223
  • Evalue 2.30e-55
DNA-directed RNA polymerase subunit sigma24 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 243.0
  • Bit_score: 226
  • Evalue 3.90e-56
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 244.0
  • Bit_score: 181
  • Evalue 3.80e-43

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Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 768
GTGCCTGCTGATGATCAGGTGACCTCACTGACTGGGGTCAGCGGAAGCGCGCAAAATGGTCGGGTCGCGTTTACCACCACGCACTGGAGCGTGGTGCTAGAGGCACAAGGCGAATCGCCAGCGGCACAAGAGGCACTTGAAAAACTTTGCCGCATTTATTGGCGGCCCATTTACGGCTTTGTGCGGCGAGAGGGTGCTGGGCCGGAGGAAGCGCAAGATCTTACGCAAGGTTTTTTTGCTCTCTTATTGGAGCGCCGGGACCTGCGGACTGTGCGCAAAGAGAAGGGGCGATTGCGTTCTTATCTGCTCACGGCAGTGAAGCACTTTCTGGCCGACGAACACCGCCGCGCGATGGCGATCAAACGTGGCAAAGGCCAGCAGCTCATTCCGTTGGAAGAACTGCGTACTGAGGAACGGTGCGGCATGGAGCCAGCCGACCCGCTCACTGCCGAGCGCATTTACGAGCGCCGTTGGGCTTCGACATTGCTGGATCGCGTGCTGAGCCGATTAGAGGATACTTACCGTAAGCGAGGTAACGCGGCGTTGTTCGATTCCTTTAATCAATTGCTGGCAGACGAGCCGGGGGCGCCGTCGCAGGCGGATATTGCCGCGCAGCTCGGGATGACCGAAAACGCCGTCTCGCAGGCCTTTCATCGATTTCGGCAAAGCTATCAATCGTTATTGCGCGAGGAAATTGCCAATACCGTTGCGACTCCCGGCGATATCGAAAACGAGTTGCGTTATCTGATTGCTGTGATTCGCGCATAA
PROTEIN sequence
Length: 256
VPADDQVTSLTGVSGSAQNGRVAFTTTHWSVVLEAQGESPAAQEALEKLCRIYWRPIYGFVRREGAGPEEAQDLTQGFFALLLERRDLRTVRKEKGRLRSYLLTAVKHFLADEHRRAMAIKRGKGQQLIPLEELRTEERCGMEPADPLTAERIYERRWASTLLDRVLSRLEDTYRKRGNAALFDSFNQLLADEPGAPSQADIAAQLGMTENAVSQAFHRFRQSYQSLLREEIANTVATPGDIENELRYLIAVIRA*