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13_1_20cm_full_scaffold_309_11

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(11284..11970)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0E9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 186.0
  • Bit_score: 311
  • Evalue 9.90e-82
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 228.0
  • Bit_score: 425
  • Evalue 6.70e-116
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 186.0
  • Bit_score: 188
  • Evalue 2.10e-45

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 687
ATGGATCCCGCTCTCGCCTTACCTGCTCGCCGTATTTCGGATTTGTTGTCGTCCGGTCTCGAGGCTCGTGCTAAGTCTAGACGCGAGACAATGGACCAGCCGCGGGTCGATCCAGATCAAGAGTTGGTAACGCGTACGCAATCGGGCGATGCTGGCGCCTTCGATGAACTGGTCATCAAATACACTCCGCGTCTTTATGGTCTCGTGTACAACATGACCTCGAACCACGAGGACACGAACGATCTGTTGCAGGATATTTTCGCCAAAGCGTACCGCGCAATCCGCGGGTTCCGCGGCAAATCTTCCTTTTATACGTGGATTCATTCCATTGCTGTGAATATGACGCTCAATTTTCTGAAGAAACGCGGCCGGCGTTTTCAACTGAGCCTCGATGATGTCGATGCCAGCATTCAAAACGACAAGGAGTTCCTGGAAAGCACGGCCACGAGCAGTCCGGTGCGCGAAGCAGACTTGTCCGAGCTGCAGCGAAGATTGAACGAGGCCATGATGAAATTGTCTGATGAACACAGAGCCGTGGTTACCATGTTCCATATCCAGGGGATGCCCCACGCAGAGATTAGTAAAATCTTGCGCGTCTCGGAAGGAACGGTACGTTCCAGGCTCTTTTACGCGAATCGGCAGCTACAGAACTATCTGGATGAATTTCGGAAAAATCCTGTTTCCTAA
PROTEIN sequence
Length: 229
MDPALALPARRISDLLSSGLEARAKSRRETMDQPRVDPDQELVTRTQSGDAGAFDELVIKYTPRLYGLVYNMTSNHEDTNDLLQDIFAKAYRAIRGFRGKSSFYTWIHSIAVNMTLNFLKKRGRRFQLSLDDVDASIQNDKEFLESTATSSPVREADLSELQRRLNEAMMKLSDEHRAVVTMFHIQGMPHAEISKILRVSEGTVRSRLFYANRQLQNYLDEFRKNPVS*