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13_1_20cm_full_scaffold_99_18

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 21003..22220

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 396.0
  • Bit_score: 483
  • Evalue 2.60e-133
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 396.0
  • Bit_score: 482
  • Evalue 8.20e-133
RpoD family RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 391.0
  • Bit_score: 434
  • Evalue 3.90e-119

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1218
ATGGCAGCGTCCCGGTTATACTCGGCGATTGAATTACAGAGCCGCATTCGCGAACTGATCAAACTCGCGAAAGAACAAGGCTATCTCACGTTTGACGACTTAAACGAGGCGTTGCCTGAGGGAATCACTGACGCCGATGAATTGGACCTCATTCTCACGCGGCTGCGTCGCCTGGAGATCGACATCATTGAAGCGTCGGAAGTCGATCGCTACAAGGACGGGAAAAAAGATACAGAGGAGGAGATAGAAGAGGAAGAGAGGCCCGAAGCCAAGGTTGATATCCTGGACGACCCGGTACGGATGTATCTCAGACAGATGGGCCAGGTCCCGCTTCTGACCCGGGAACAGGAAGTAGAAATATCCAAACGGATCGAGGAAGCCGAAGACATGGTGCTGAAGCACATCAATCGCTTCGGTTTTATTGCACAGGCCCACTTGGACCTCGCCACGAAGCTGATCGAGGGCAGGGAACGGTTCGATCGGGTGATTCTCGACAAGAAAATCGAGAGCCGGGAAAGGTATATGAAAAATCTCCCGCGCCTCTGCAAACAGGTGGAACAATTAAGCGCATCGATCACCCGGCAGTTTTGCGAGGTCTCGCGCAATTCCTTAAAAAAGCGACCGCCGAAGCTCCGGGCATTGCAAAGAATGATGACTTCTTTGCAACGGCTTTATCCTCTTTTTTACCTCAAGCAGAAAGTCACGGAGGAATTTGTGCACCTGGCGGATGACGCGCATCACACCTCGCTTTACCTGCAAACCGAGCTGGCCAAAAATCCTCGCAGTAAGAAACGGCGATTGCAGCTTCAGACCAACACCCGCGAGCTCGAAAAGGGGCTGTGGTTCCCGCTTGCCGAATATGCGAAAGAATACCAGACGCTTAAGGGTTGGATGCGCCAGGCATTCAAGGCCAAAACCGAAATGGTGGAAGCCAACCTGCGTCTCGTTATCTCGATCGCAAAAAAATACACCAATCGCGGCCTATCCTTTCTTGACCTGATCCAGGAAGGAAATATGGGGTTGATGAAGGCGGTCGAGAAATTCGAGTATCGGCGCGGGTACAAGTTTTCCACCTACGCGACGTGGTGGATTCGCCAGGCCATCACCCGCTCGATTGCCGACCAAGCCCGCACGATTCGCATCCCGGTCCACATGATCGCCAGAGGAAGTGGCCGAAGAAGTGCTCCTGCCAGTAGATCGCGTGCGGTCAGTTCTTAA
PROTEIN sequence
Length: 406
MAASRLYSAIELQSRIRELIKLAKEQGYLTFDDLNEALPEGITDADELDLILTRLRRLEIDIIEASEVDRYKDGKKDTEEEIEEEERPEAKVDILDDPVRMYLRQMGQVPLLTREQEVEISKRIEEAEDMVLKHINRFGFIAQAHLDLATKLIEGRERFDRVILDKKIESRERYMKNLPRLCKQVEQLSASITRQFCEVSRNSLKKRPPKLRALQRMMTSLQRLYPLFYLKQKVTEEFVHLADDAHHTSLYLQTELAKNPRSKKRRLQLQTNTRELEKGLWFPLAEYAKEYQTLKGWMRQAFKAKTEMVEANLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIARGSGRRSAPASRSRAVSS*