ggKbase home page

13_1_20cm_full_scaffold_99_19

Organism: 13_1_20CM_Verrucomicrobia_54_28

partial RP 40 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 22222..22575

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 211
  • Evalue 5.50e-52
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 211
  • Evalue 7.80e-52
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 123.0
  • Bit_score: 190
  • Evalue 2.90e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 354
ATGGCGCAACAACCAATCTCTCTCCAGTCTCCGGTGGGCGAGAGCGAAGAAACAAATTTTGGGGATTTTATCGAGGACAGGGGCGCCGAAAACCCAAGCGACATGACTGCGATTGTGTTGTTGAAAGAAAAAATTAAGGACGTGCTGGAAACCCTGACCGATCGTGAAAGGCAAGTCCTCGAGCAGCGATTCGGGCTGGTCGATGGCTACAGCCGAACCTTGGAAGAAGTAGGCCGGCAGTTTCAGGTCACCCGCGAGCGCATCCGCCAGATCGAAGCAAAGGCATTGCGCAAAATGCGGCATCCAACTCGTATTCGGCAACTCGAAGGCTTCCTTGAAGCTCCCGGCCTCTGA
PROTEIN sequence
Length: 118
MAQQPISLQSPVGESEETNFGDFIEDRGAENPSDMTAIVLLKEKIKDVLETLTDRERQVLEQRFGLVDGYSRTLEEVGRQFQVTRERIRQIEAKALRKMRHPTRIRQLEGFLEAPGL*