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13_1_20cm_4_scaffold_17472_2

Organism: 13_1_20CM_4_Actinobacteria_66_15

partial RP 20 / 55 BSCG 18 / 51 ASCG 0 / 38
Location: comp(1102..1635)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE38_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 4.10e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV79741.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multi UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 5.70e-30
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 163.0
  • Bit_score: 139
  • Evalue 1.10e-30

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAACCTCGGGGCGCGCCGGATGGCCACGGCGAAGTCTGACGACGAGGCATTCGAGGCCCTTTTCACAGCCGAATACGCTCGCGTCGTCGGGATAGCGAACCGTGTTCTCGCCGATCCGCACGAGGCGGAAGACGTGGCGCAGGACGTTTTCATCGACTTCCACAGGCTGCACTCGGCGACGGCGCAGTACGCGCCGGCGTGGCTCCACCGGGCTGCCGCCCACGCCTCGCTCAACCGCCTGCGCGGGGCGCGGCGCAGGCAGAAGCGCGAGGTGGCGCAGGCCGCGGAGGAGGGCGACCGCATGCTCGATCCGCAAAAGCAGCTCGAGGTCAACGAGGATCGCCGCCAGGTGCGACAGGCGCTTGGCAAGCTGGCTCCCAAACCGGCGGCCGCCCTCGCAATGCGAGCGAGCGGGCTCAGCTACGCCGAAGTCGCGCAAGCGCTCGGCGTCGGAATCGGACAGGTTGGAACTTTATTGAGGCGCGCAGAAGCCGCGCTGCGCAAGGAGGTCACCCGTGGCACATCTAACTGA
PROTEIN sequence
Length: 178
MNLGARRMATAKSDDEAFEALFTAEYARVVGIANRVLADPHEAEDVAQDVFIDFHRLHSATAQYAPAWLHRAAAHASLNRLRGARRRQKREVAQAAEEGDRMLDPQKQLEVNEDRRQVRQALGKLAPKPAAALAMRASGLSYAEVAQALGVGIGQVGTLLRRAEAALRKEVTRGTSN*