ggKbase home page

13_1_40cm_2_scaffold_5160_13

Organism: 13_1_40CM_2_Acidobacteria_60_7

partial RP 37 / 55 BSCG 38 / 51 ASCG 10 / 38
Location: 9389..10042

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E204A similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 185.0
  • Bit_score: 165
  • Evalue 5.00e-38
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 198.0
  • Bit_score: 132
  • Evalue 8.50e-28
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 199.0
  • Bit_score: 119
  • Evalue 1.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGCCTGGGGGACTAGAATCTCCCGGACAGCGCGCAATCAGGAGAAACGGGTGGAGCGGACCGAGCAGCCGGCCGGCGGGCCAGTCGCCAGCGCGGATGCGCAAAGTGAGGACGCGGCGCTCGCGGCTGCCTGCCGCCGCGGCGACCTGCGCGCCTACGAACGTCTCTACGAGCTTCACGGCACGCGCATGAAAAGCCTCGCGCGGAATCTCCTCGGGAACCACACCGACGCCGAAGACGCCGTCCAGGAAACTTTCCTGAAAGTGCAGCGCGCCATCGGCGGTTACTCCGGCAAATCCGCCTTTTCCACTTGGATCTTTCGCATCCTGATCAATTCCTGCTTCGACATGCGCCGCAGCCGTTTGCGCCGGAGGGAAGTGCAGGAGCCGGAGCCCGCTCCGGGCGAGCCGGTACTCGAGCACCGCGCTCCGGGGTCTCATCCCTCGCTGCGCCTCGCGCTCGAACGCTCGCTGGCTGGCTTGCCCGGTCGTCAGCGCGAGATTTTCTTGCTCTACGAAGTCGAAGGCTTCGCGCACGCCGAAATCGCCGCCCTGTTGCATGTCAGCGAGGCTGTGTCGAAGAACTCGCTGTTTCAGGCCAAAAAAACTTTGCGGCAGATGCTCGAACCGCCTCGCGCGGCCGGCCGGCTTTAG
PROTEIN sequence
Length: 218
MAWGTRISRTARNQEKRVERTEQPAGGPVASADAQSEDAALAAACRRGDLRAYERLYELHGTRMKSLARNLLGNHTDAEDAVQETFLKVQRAIGGYSGKSAFSTWIFRILINSCFDMRRSRLRRREVQEPEPAPGEPVLEHRAPGSHPSLRLALERSLAGLPGRQREIFLLYEVEGFAHAEIAALLHVSEAVSKNSLFQAKKTLRQMLEPPRAAGRL*