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13_1_40cm_3_scaffold_2806_5

Organism: 13_1_40CM_3_Acidobacteria_55_6

partial RP 21 / 55 BSCG 21 / 51 ASCG 3 / 38
Location: 5329..6921

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM65255.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 519.0
  • Bit_score: 376
  • Evalue 4.90e-101
GAF sensor-containing diguanylate cyclase id=12555486 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 499.0
  • Bit_score: 193
  • Evalue 4.20e-46
GAF/GGDEF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 221.0
  • Bit_score: 175
  • Evalue 5.60e-41

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAACAAGCAAGTCATAGTACTAACTGATGCCAAGGCCAAACCGGCGGGCGAACTGCTTGAAATCCTCAGGGCGGCAGACATTTCGTTCATAACTGACGACTGGCGCGAGACACACACGTCAGCAGCATCGAATTGGACTGATAGTAATCCTAATTCGTGTGAGCCGCTGGCGGTCATTTACCAAGTAAGCGCCGACTCGAACGCGGAAGAACTTGCTCTCGTTATTTGTCGTGCGACCACGGAGTGGCCTTCAGTTCCCGTTGTCGTTTGCCGCGCGGAGCCAACTGAGCGACTGACGCGCGGCGCGACGCCACCTACCGCAGAGCAGCTAAAGCGACTCGGTTTTCGTGCAATTGCCGACAGCCCGGCGCAATTGCCCGCGTTGTTAAGGCAAGTCGAGGAAATTCCGGGCACTGGTGAATTGAGGCCGCCGGACAACTTCAGGAGTATTCCCGAAAGCGGCGCCTTCTCGCTCCCGACACACGCTTGCAGTGAAGACCTCCGCACCGCATTCGCTTTGCTGGCGTCGCTTCACCTCGCGTCGAATCAAAAAGAGGCCGCTCAGGCCGCGCTCGGCGGGGTCGCGCAGCTGATTAACGCCGATCGCTGGTCGATATTCCTGGTGTCGCAAGCGTCCACTGAGAATTTGACGTTCGCGGCACTCGCCGGCAGCGTGGTTTCTGCAAATGGCGAGTTAGCATTTGATGAGGAATCGCGAAATGAACTACTTGATGGTTTCGCACAACCTATCGAGGCGGAAACCAGGGCTACGCATGAAGCCGCAGCGATGATGAAAGCCGTTAGAAGGAGCGAGAATGGTCGTCGCGTCATGGCCCTGCCTTTGATCAGCGGCGAAAGAGTTCTCGGGGTATTGGAAGGTGTCCGCAGTAGCGCCGACCGGCGTTCATTCTCACAATCCGAAACGATGTTGCTCGAGGCGCTGGCGATTTCGATCGCGGCGGCGCTCGCCAATTCCGTTCGCATAGCCGAAGCCGAACGGTTATCGCTCACTGACGATCTCACCAGGCTGCACAATGCGCGTTATCTGCGCCAGTTTTTGGTTAACGAGATCAAACGCGCTCGTCGTTACAGCTCAAGCGTTGCGGCTGTGTTTCTCGACCTTGACGATTTCAAGCTGGTCAACGATCAGCATGGACACCTGGTCGGCTCGCATGTGCTGATGGAAGTCGCGGCGCTGCTCTTGCCATCGGTGCGCGACACCGATTGCGTCGTGCGATATGGCGGCGATGAATTTCTACTAGTATTGCCGGATGCGGGACTGGAGGACGCCACCCAGATTGCCGAACGCACCCGGGCTAAAATCGAGAGACAGCGATTTAACGGCGGTCGCCGATTGAAAATCTCGCTGACGGCCAGCTTAGGAGTGGCGGTTTTCCCCCAACATGCGTTGTCGCCGCAGCAGTTGATTGCGTGTGCCGATCGGGCGATGTATCATGCGAAGGCCGCCAAGAAGAACTCTGTTTGGGTTATCAACGACTCGACCGCAGCTCGTGCGAGCGACCACCCCGATACTAATCCGACAGTCCCGACTCAATTTCAAAGAATTCCCGACGAAAAGTTAATTTCGTAA
PROTEIN sequence
Length: 531
MNKQVIVLTDAKAKPAGELLEILRAADISFITDDWRETHTSAASNWTDSNPNSCEPLAVIYQVSADSNAEELALVICRATTEWPSVPVVVCRAEPTERLTRGATPPTAEQLKRLGFRAIADSPAQLPALLRQVEEIPGTGELRPPDNFRSIPESGAFSLPTHACSEDLRTAFALLASLHLASNQKEAAQAALGGVAQLINADRWSIFLVSQASTENLTFAALAGSVVSANGELAFDEESRNELLDGFAQPIEAETRATHEAAAMMKAVRRSENGRRVMALPLISGERVLGVLEGVRSSADRRSFSQSETMLLEALAISIAAALANSVRIAEAERLSLTDDLTRLHNARYLRQFLVNEIKRARRYSSSVAAVFLDLDDFKLVNDQHGHLVGSHVLMEVAALLLPSVRDTDCVVRYGGDEFLLVLPDAGLEDATQIAERTRAKIERQRFNGGRRLKISLTASLGVAVFPQHALSPQQLIACADRAMYHAKAAKKNSVWVINDSTAARASDHPDTNPTVPTQFQRIPDEKLIS*