ggKbase home page

13_1_40cm_3_scaffold_2261_6

Organism: 13_1_40CM_3_Chloroflexi_70_6

partial RP 16 / 55 BSCG 16 / 51 ASCG 3 / 38
Location: 6500..6790

Top 3 Functional Annotations

Value Algorithm Source
hupB; HU-beta DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 91.0
  • Bit_score: 128
  • Evalue 7.10e-27
hupB; HU-beta DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 88.0
  • Bit_score: 126
  • Evalue 4.20e-27
Histone family protein DNA-binding protein id=3693134 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 90.0
  • Bit_score: 126
  • Evalue 1.50e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 291
GTGGCTGGGATCTCGAAGTCAGAGACCATGAATCGGCTCTCGGAAAAGACCGGTCTCACCAAGAAGCAAGTAGGCGAGTTCCTCGACGAGCTCGCGGGGCTCGCCTACCGCGAAGCGCGCAACGGGTTCACCATCCCGGGCGTCGGCAAGCTCGTGATCGTGGACCGCAAAGCGCGCATGGGACGAAACCCCGCGACCGGTCAGCCGATCTCGATTCCCGCGAAGCGCGTGCTCAAGTTCCGCATCGCCAAGCAGGCCAAGGACGCCGTCCTCGCCAAGCGCACCAAGTAG
PROTEIN sequence
Length: 97
VAGISKSETMNRLSEKTGLTKKQVGEFLDELAGLAYREARNGFTIPGVGKLVIVDRKARMGRNPATGQPISIPAKRVLKFRIAKQAKDAVLAKRTK*