ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_40cm_4_scaffold_1411_22

Organism: 13_1_40CM_4_Chloroflexi_68_4

partial RP 41 / 55 MC: 4 BSCG 39 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 15758..16261

Top 3 Functional Annotations

Value Algorithm Source
Metal dependent phosphohydrolase with GAF sensor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRX6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 156.0
  • Bit_score: 129
  • Evalue 4.00e-27
GAF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 165.0
  • Bit_score: 214
  • Evalue 1.30e-52
GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 162.0
  • Bit_score: 124
  • Evalue 2.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 504
GTGATCGACGACAGGGTCGCTTTCATCATGATGAAGCTCGGCCACCTCGCGGCGCAGCGCGATCGCGACGCGTACCTGCGCGGATTGGTCGAGCTGTGCAGCCAGGCCACCGAGGCCGAGCGCGCGACGGTGTTCCTGGTGAATCACAAGCGAAAGGAGCTGTGGTCGAAGATCGCGCAACGCACCGCGGTCGAGATCCGCCTCCCCATCGGACGCGGGCTCGCCGGGCACAGCGCCGCCACCGGAGAGACGATCAACGTGCCGGACGCCTACGCCGATCCACGTTTCGACCGGAACGTCGACCACCGCACCGGATACCGAACGCTGAACGCGCTCGTGGTGCCGGTATGGGGTAGCGACGAGAGCACCGTGGTCGGCGTCATACAGGTCTTGAATAAGAGTCACGGCACCTTCGAACGACGAGATCAGATGCTGCTCGAACGGATCGCCCAGACCGTGGGTCCGATGCTCGAGCAGATCCAGACCGCCGAGGTCGGCGATTAG
PROTEIN sequence
Length: 168
VIDDRVAFIMMKLGHLAAQRDRDAYLRGLVELCSQATEAERATVFLVNHKRKELWSKIAQRTAVEIRLPIGRGLAGHSAATGETINVPDAYADPRFDRNVDHRTGYRTLNALVVPVWGSDESTVVGVIQVLNKSHGTFERRDQMLLERIAQTVGPMLEQIQTAEVGD*