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13_1_40cm_4_scaffold_535_15

Organism: 13_1_40CM_4_Chloroflexi_68_4

partial RP 41 / 55 MC: 4 BSCG 39 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(12702..13310)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Oceanimonas smirnovii RepID=UPI00037BA732 similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 187.0
  • Bit_score: 87
  • Evalue 1.20e-14
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 189.0
  • Bit_score: 194
  • Evalue 1.30e-46
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 211.0
  • Bit_score: 86
  • Evalue 1.30e-14

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 609
TTGGAACGGGGACCGAACGAAAGAATCTTGTCGCACCTCGCGTTCGCGCGCGCGGTGGCCCGGCGATCGCTGTCGCCGAAATGCAGCCCGGAGGATCGCGAGGATCTGCTTGCTTGGGGCGTGGTCGGATTGGTGCAGGCGGCCCGGCGCTATCGCGAAGGCGGCCGGGCGAGCTTCGCCGCGTTCGCGGCGCGGCGCATCCGTGGGCAGGTGCTCGACGCGCTCCGCGAAGCCGATCCGCTGCCCCGCGCGGCGCGCCGAGAATGGCGAGCACGCGGCCGGCGCAGTGACCCCTTTCCGGTGCAGTCGCTCGATGAGTGGGTCGACCGGGGCCGCGAGGCCTTTCGACCACTGCACTCCCCTGCCGCCAGGGCCCTGGCGCGGGATCCGCGCTGGCGTGACGTGCGTCGCGCGCTCGGGCTCCTCACGCCGCTCGAGAGGCGCGTGCTGGTGCTGCACTTTCAACATGGTCTGACGCTCAAGGAAATCGGGGCTCGGGTCGGCCTGTCCGAATCCGGCGTGTGCCGCGTCCGCGCCCGAGCACTCGCCAAGCTGCGGCGCGCCTGCGTACCCGATGATGTCGTCGATGCCGAGTCGCGAGGGGCGTGA
PROTEIN sequence
Length: 203
LERGPNERILSHLAFARAVARRSLSPKCSPEDREDLLAWGVVGLVQAARRYREGGRASFAAFAARRIRGQVLDALREADPLPRAARREWRARGRRSDPFPVQSLDEWVDRGREAFRPLHSPAARALARDPRWRDVRRALGLLTPLERRVLVLHFQHGLTLKEIGARVGLSESGVCRVRARALAKLRRACVPDDVVDAESRGA*