ggKbase home page

13_1_40cm_4_scaffold_558_5

Organism: 13_1_40CM_4_Chloroflexi_68_4

partial RP 41 / 55 MC: 4 BSCG 39 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5015..5656

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 210.0
  • Bit_score: 220
  • Evalue 1.80e-54
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 208.0
  • Bit_score: 196
  • Evalue 7.30e-48
Formamidopyrimidine-DNA glycosylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=FPG_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 208.0
  • Bit_score: 196
  • Evalue 2.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 642
ATGACCGGGAGGCTGCTGGTGCGACAAGCCGGCGCGCCGCAAGACGCGTACGTGCGCGGCCATTTCATCCTCGAGAGCGGACGAGAGCTGCGCTTCGGCGATACACGCAAGTTCGGCCGCATCGTCCTGGTGCCGCAGCAGGCCATCCGCGCCGAGTCCGCCGATGGCGCTCGCGCCAAAGGAGCGCTCCACGAGCGGCTGGGGATCGAACCGTTGTCCCGAGCGTTCACCACATCGCGGTTCGCGCGCCTGCTGTCGGGTCGCCGCCGCTCGCGCCTCAAGCCGCTACTGCTGGACCAGACCTTCGTCGCGGGCATCGGCAACATCTACGCGAACGAGGCGCTGTATCGGGCGCGCATCCATCCACTCCGATCCGCGGGCAGCCTTCGAGGGGAACAGGTGCGCGCGCTCCATCAGGCGATCCTCGCGGCGCTGCGCCGCGCCATCACGCTTCGCGGCTCGTCCATCGACGACTACCGCGACGCGCGCGGCCGCCGCGGTCGAATGCAGCGCGAGTTCCTGGTGCACGGCCGCGAGGACGAACCCTGCGCGCGATGCGGCCATGCCATCCGCAAGACCTGGGTCGCCGGCCGCGGCACGTACTGGTGCCCGCGGTGCCAGCGCGCGCCGGTACAGCGATGA
PROTEIN sequence
Length: 214
MTGRLLVRQAGAPQDAYVRGHFILESGRELRFGDTRKFGRIVLVPQQAIRAESADGARAKGALHERLGIEPLSRAFTTSRFARLLSGRRRSRLKPLLLDQTFVAGIGNIYANEALYRARIHPLRSAGSLRGEQVRALHQAILAALRRAITLRGSSIDDYRDARGRRGRMQREFLVHGREDEPCARCGHAIRKTWVAGRGTYWCPRCQRAPVQR*