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13_1_40cm_4_scaffold_1022_2

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(381..1790)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPP8_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 398.0
  • Bit_score: 342
  • Evalue 4.90e-91
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 398.0
  • Bit_score: 342
  • Evalue 1.40e-91
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEU36060.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensi similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 398.0
  • Bit_score: 342
  • Evalue 6.90e-91

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Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
TTGAGTTCGACGGGAAAAGCGCCGGCGTGGGAACGACCGCCGGAGGTGCGTGAGCACGACATTCCGGAGCCATCGCTTCCATTAGAGCAGGTGGAAATCAAGGCAAGTCTCTTACCTTATCTCCGGCTGCTTTGGGAAAACCGCAGATTCATGCTGCGCGCTGGAGTTTATTCGTTCCTCGCAAGCATGCTCATCGCGATGCTGATTCCCGTGCGCTACCAATCTGTGACGAGGTTGATGCCACCCGATGGCCAGTCCGGATCGTTGGGAATGCTTGCCGCAATGACAGGACGTGCAGGCGTGGGAGGACTGGGGAGTGTTGCCGGCGACGTGTTGGGCGTGAAAAGCCCCGGCGCGCTCTTTGTGGGCATCCTCCAGAGCCAGACGGTACAGGACCGGCTGATCGAGCAATTCAATCTGAAGAAGCTTTACGGAGATTCCAAGATCGAGGACGCAAGAAAAGACCTGGCCGAGCACACCGATGTCGCGGAGGATCGCAAGAGCGGGATCATCACCATCGACGTGACGGACCACGACGCGAAGCGCGCGGCGGCGATGACGCAATCGTACGTGAACGAACTGGACCGCCTCGTGGCCCAGGTCAGCACTTCTTCGGCGCGGCGCGAGCGGATTTTCTTAGAGGGGCGTCTGAAAGCGGTCAAAAGCGAGCTAGACAGCTCGGCGAAGAACTTCAGTGACTTCGCCAGCAGAAACACCGCGATTGATATTCCCGAACAAGGCAAGGCGATGGTGGAAGCTGCGGCCAGGTTGCAGGGCCAACTGATCGCGGCACAATCCGAGCTTGAAGGATTGAAACAAATATTCACCGACAATAATGTGCGCGTGCGCGCAACGGATGCGCAAGTGCGCGAGCTAAGGAAAAAGCTGAGCGAGATCGGCAGCGCCGGAACGGATGGAGGCGCGAAGAGCGACAACTCGTTATATCCGTCGATTCGCAAGCTCCCCATTCTCGGAGTCACCTATGCGGACTTATACCGGCAAACGAAGATTGAGGAGACCGTGTACGGTTTGCTGACGCAGCAATATGAGCTGGCTAAAGTCGAAGAAGCAAAAGAAATCCCCAGTGTGAAAGTCCTGGATGCGGCAATCGTCCCGACGAAGAAGTCATTTCCTCCGCGCGGGGCGATCACCCTCTTGGGAACTCTGCTTGGGGTCTCGACAGCGATGACGTGGGTCGTTGGCAAGGCGCGATGGGATGCGATAGAGGCGGGCGATCCGCGAAAGGAATTTGCCACGGAAGTGTTCACAACGGTGCGGGCAAGTCTGCCAAAGTTCTCGCGGAACGGCGCAGGCGCGGAATCGAACGGACACCGGCAGGGGAGCTTGTGGAAGAAGTCGGAAGCCAGGCCGGAAGGCAAAGAGCACGAGGAAGAGAAGCATGGCGCCTAG
PROTEIN sequence
Length: 470
LSSTGKAPAWERPPEVREHDIPEPSLPLEQVEIKASLLPYLRLLWENRRFMLRAGVYSFLASMLIAMLIPVRYQSVTRLMPPDGQSGSLGMLAAMTGRAGVGGLGSVAGDVLGVKSPGALFVGILQSQTVQDRLIEQFNLKKLYGDSKIEDARKDLAEHTDVAEDRKSGIITIDVTDHDAKRAAAMTQSYVNELDRLVAQVSTSSARRERIFLEGRLKAVKSELDSSAKNFSDFASRNTAIDIPEQGKAMVEAAARLQGQLIAAQSELEGLKQIFTDNNVRVRATDAQVRELRKKLSEIGSAGTDGGAKSDNSLYPSIRKLPILGVTYADLYRQTKIEETVYGLLTQQYELAKVEEAKEIPSVKVLDAAIVPTKKSFPPRGAITLLGTLLGVSTAMTWVVGKARWDAIEAGDPRKEFATEVFTTVRASLPKFSRNGAGAESNGHRQGSLWKKSEARPEGKEHEEEKHGA*