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13_1_40cm_4_scaffold_2328_16

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(16091..16768)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK3_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 214.0
  • Bit_score: 229
  • Evalue 2.90e-57
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 208.0
  • Bit_score: 235
  • Evalue 9.70e-59
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 214.0
  • Bit_score: 229
  • Evalue 8.20e-58

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Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCCGCTCCCCCGATGGGCTCTTGCTTTGGCCGATGACAACGGTTGCTCGGGTAGCACGAACGCCGCCCTAGCCTCGGTGACCTCTTTGCCTAACCTTGATGAGCGAGCACTGGTGGCGGAAGCGCAAGCTGGCAGCCGTGCCGCTTTCGAGGAACTGGTCCGCCGGTACGACCGCGACGTACTGCGCCTCGCGCTGAACCTCATGAAGCGCCCGGAAGACGCCCGCGACGTTTACCAGGAGGCTTTCCTCAAGGTCTACCGCAATCTTCACCGCTTCCGCTTCGAATGCAGCTTTTACACCTGGCTCTACCGCATCGTCACCAATGTCTGCCTCGATCACCTGCGCCGCCGGCAGGCGCGTCCCGAGGATCAAGCACCGGAAATGAACTCTGGCAAGCAGGAGGAAGGCATTACTGATTTTTTTGAACGGCAGCGCGAGCATCGGCCAACGCTGGACCCAGAACGCACGCTCATGGGCCAGGAGATCAAGGCGCGCATCGCGCGCGCCTTGGAGCGCCTCTCGCCCCGTGAACGGATTGTTTTTGAAATGAAACATTACCAAGGCCTGAAGCTCCGCGCCATCGGCGACGTGCTCGGCACCACTGAGGAAACCGTGAAGAATTCTCTTTTCCGCGCTACGCGCAAACTCCGCAATGAGTTGGGAGGCTTGCGATGA
PROTEIN sequence
Length: 226
MPLPRWALALADDNGCSGSTNAALASVTSLPNLDERALVAEAQAGSRAAFEELVRRYDRDVLRLALNLMKRPEDARDVYQEAFLKVYRNLHRFRFECSFYTWLYRIVTNVCLDHLRRRQARPEDQAPEMNSGKQEEGITDFFERQREHRPTLDPERTLMGQEIKARIARALERLSPRERIVFEMKHYQGLKLRAIGDVLGTTEETVKNSLFRATRKLRNELGGLR*