ggKbase home page

13_1_40cm_4_scaffold_321_5

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 4059..4796

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 249.0
  • Bit_score: 304
  • Evalue 1.40e-79
Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F236_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 249.0
  • Bit_score: 304
  • Evalue 1.00e-79
pseudouridine synthase rsuA family protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 249.0
  • Bit_score: 304
  • Evalue 2.80e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidobacterium capsulatum → Acidobacterium → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGCTTCAGAACGATTGCAGAAAATTATGGCGGCGCGCGGTATTGCGTCGCGGCGCAAGGCGGAAGAAATCATTGCGGCGGGGCGAGTGACGCTCAACGGAAGAGTAGTCGTGGAACAGGGTACGAAGGCCGATCCGGAACGGGACGTGATTTGCGTGGATGGGAAGCCGTTGAAGAGGCCGGAGCGGCTCGTGTATTTCGTGCTGAACAAGCCGAAAGGTTATGTGACCACGGTCAGCGATCCGGAGGGACGGCCGACGGTGATGGATTTGCTGCCCAAGCGCGGGGAGCGCGCCTACCCGGTGGGGCGGCTGGATTATGCAAGCGAAGGATTGCTCTTTCTGACGAATGACGGCGCGCTGGCGCACAAGTTGATGAAAGCGGGTTCGCATGTGCCGAAGACATATCTGGTGAAGATCAGCGGAAAGCCCGAAGAGAAAGATATCGAGCGTTTGCGAGCGGGTATTTCAATTGAACTGGAAGACGGGCGGCGCGTGAAGACTTCTCCGGCGAAAATGCGGTTGGCAGAAGATGGCGCGAATCCGTGGTACGAGGTGATTCTGATCGAAGGACGGAACCGGCAAATCCGGCGGATGTTTGAGCGCGTAGGGCATCGCGTGGAGAAAATCAAGCGCGTGAGAATAGGACCGCTGGTGCTGGATGTGGAGCCGGGAAAATTTCGCGAGTTGACGGGGAGGGAAGTGAAGGGGTTGAAGCGAGCAGCAGACGGAGAATGA
PROTEIN sequence
Length: 246
MASERLQKIMAARGIASRRKAEEIIAAGRVTLNGRVVVEQGTKADPERDVICVDGKPLKRPERLVYFVLNKPKGYVTTVSDPEGRPTVMDLLPKRGERAYPVGRLDYASEGLLFLTNDGALAHKLMKAGSHVPKTYLVKISGKPEEKDIERLRAGISIELEDGRRVKTSPAKMRLAEDGANPWYEVILIEGRNRQIRRMFERVGHRVEKIKRVRIGPLVLDVEPGKFRELTGREVKGLKRAADGE*