ggKbase home page

13_1_40cm_4_scaffold_344_4

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 4036..5472

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=880073 species="Bacteria; Caldithrix.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 403.0
  • Bit_score: 307
  • Evalue 2.50e-80
DNA polymerase IV n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUV2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 403.0
  • Bit_score: 307
  • Evalue 1.80e-80
DNA polymerase IV similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 389.0
  • Bit_score: 266
  • Evalue 1.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldithrix abyssi → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 1437
ATGGACGTCTGTGTCGAAAGCGTAGTCCTTACCCCCGCCATCGAGGCCATGCAGGAGTGCGGTGCTCCCGCGGAAGAAACGGAAGAGAAAGATCGCGGCGCCGAAACTCCGCGCACCGGCGATAACCCTGCAGATTCTTCTAAAACGAAAACGCCGCAAACCGAAACGGCGGCGGAGAAAAACCCGTGGTCTGCGTGGGCGTGGCTGGGACTGTGCAAAACGCCCACCCGCAAGATACCCAACATCGTGCACGTAGACGTGGACGCGTTTTTTGCCTCGGTCGAGCAGGTGCTCAACCCCCAGTTGCGCGGCAAGCCTGTGCTGGTGGGGCGCGGCTGTGTGGCTTCGGCGAGCTACGAAGCGAAGTTCCTCGGCGTGCACACGGCGATGAGTTTTCGCGAAGCGCTGCGCGTCTGCCCAAAAGCCATCGTCGTACCCGGACAATACGAGCACTACGCGGATTTTGCCGAACGCGTGCGGCGCATTCTCGAAACCTATACGCCTGCGGTGGAAACCGCCGCGCTGGATGACTTCTACCTGGACTTCGTCGGCACCGAACGGCTCTACCCCGATTACGAAGCCACGCTGCGGCGCTTGCAGGAGGAAATCTTCGGCCGGACGGGCTTGGGCGTTTCGGTTGGCGCGGCACGCACTAAAGTGGTTGCATCGATTGCGTCGCGGCTGGAGCGACCGCGCGGATTTCGCATGGTTGCGCCCGGCCAAGAAGAAGCTTTCCTGACGCCTCTGCCGGTGGAAAAGTTGCACGGCATCGGCCACGTGCATGCGGGAATGCTGGCCGAGCGCGGCATTGCCACCATCGGCCAACTGCGCCGCGTGCCGAAGGCCGCGCTGCAAGCGGCCTTCGGCGAAGCCATCGGCCTCCAAATCTGGGAACGTGCCCGCGGGCTCGACGGCCGCGAAGTGTTGCTCCCCGCGACGCCGAAATCGGTTTCCCGCGAAACGACTATCGAAGGCGGCACCATCGATACGGAATTTCTTGGCGGCTTGATCGAGTATCTCTGCGAACGCATCGGCTCGACCCTGCGTGAATACGGCAAACAGGCGCGCACCATCGGCCTGCGCATCCGTTATGTGGACCACTTTTCGGCGCACCAGGCGGTGCGGCTGAGCAAGCCAACCAACGACGAACGCGAATTGCTCATCGCCGCCAGGGAGCTGTTCGGTAAATTGTTCACGCGGCGCGTCGCCGTGCGGCTGGCCGGCGTCAGCGTGACAAACCTCGAAGCCGACCGGCGGCAAAATGAATTGTTCGATACCGGCGCGAACCGGCGCTGGTACCTGAACCGCGAAATGGACCGCGTGCGCAGCCGTTTCGGCTGGAACGCCGTTTTTTACGGCAAGGGCCTCGCCCTGCGCGAGCACTACGCCACCAAACCAAATGGGCTGGTGCTCTCAACACCGTGCCTCTCGCGGTAA
PROTEIN sequence
Length: 479
MDVCVESVVLTPAIEAMQECGAPAEETEEKDRGAETPRTGDNPADSSKTKTPQTETAAEKNPWSAWAWLGLCKTPTRKIPNIVHVDVDAFFASVEQVLNPQLRGKPVLVGRGCVASASYEAKFLGVHTAMSFREALRVCPKAIVVPGQYEHYADFAERVRRILETYTPAVETAALDDFYLDFVGTERLYPDYEATLRRLQEEIFGRTGLGVSVGAARTKVVASIASRLERPRGFRMVAPGQEEAFLTPLPVEKLHGIGHVHAGMLAERGIATIGQLRRVPKAALQAAFGEAIGLQIWERARGLDGREVLLPATPKSVSRETTIEGGTIDTEFLGGLIEYLCERIGSTLREYGKQARTIGLRIRYVDHFSAHQAVRLSKPTNDERELLIAARELFGKLFTRRVAVRLAGVSVTNLEADRRQNELFDTGANRRWYLNREMDRVRSRFGWNAVFYGKGLALREHYATKPNGLVLSTPCLSR*