ggKbase home page

13_1_40cm_4_scaffold_485_4

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: 3562..4950

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NK3_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 458.0
  • Bit_score: 649
  • Evalue 3.10e-183
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 458.0
  • Bit_score: 649
  • Evalue 8.90e-184
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ88767.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Cand similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 458.0
  • Bit_score: 649
  • Evalue 4.40e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
TTGCCCCGCAAAGCTCATCTCCTCCTGGTCGACGATGATCCGAACACGCTGGCGTCGCTTTCCCGCGCCTTCCGGCTGGCGGGTCATGAAGCCACGGTTTGCGACAATGCCACACGCGCCCTCGAGTTGCTTCGCACGGAAAATTTCGATCTGATTCTTTCCGATGTGGTCATGCCGGGCAAAAATGGGTTGGAACTGCTCGCCGATCTGAAAACGGCGCGTGTCAAGACGCCGATCGTGCTGATCTCGGGACAAGCAAATATTGAGATGGCGGTGAAAGCGACAAAACTGGGCGCGCTGGATTTTCTGGAAAAGCCTCTCTCCACCGACAAGCTGCTGGTGACCGTCGAAAACGCCTTGCGATTGACGCGCCTGGAAGACGAAAACCGCGAATTGCGGCAGCGCCTGGGCAAGCACGAGCTGGTCGGTTCGGGCCCGGCGATGGAAAAGTTGATGGCACAAATCGAGCGAGTCGCGGCGAGTGAGACGCGCGTCTGCATTCTCGGCGAAACCGGAACCGGCAAAGAGCTTGTTGCGCGGGCCATCCATGAAAAATCGCCGCGTTGCGAGCACCCGTTCATCACCCTGAATTGCGCGGCGGTTCCCGCCGAATTGATTGAGTCCGAGCTTTTCGGTCACGAGAAAGGCGCCTTCACCGGTGCCGCAGTCCGGCATCTGGGTAAATTCGAACAGGCGGATGGCGGAACACTCTTCCTGGACGAAATTGGCGATATGCCCGTGGTCATGCAGGCGAAACTGCTCCGCGTCCTCGAAGAGGGCGAAGTCGAGCGCGTGGGCGGCGATAAGCCCACCAAAGTGAATGTGCGCGTGGTCGTGGCGACGCACCGGAATCTCGAGGAACTTGTAAAGCAAAATGCCTTCCGGCCCGATCTCTTCCATCGCATCTATGTTTTTCCCTTAGCCCTTCCGCCGCTGCGGGAGCGCCCGGAAGATTTTCCGGAACTGGTGACGCATTTCGCGCGTCAGGTGGCTGCACAAAACGGGTGGAAAGAAAAAGCATTCGCGGAAGACGCCATTGCGGAATTGCGAAAATATGGCTGGCCGGGAAATGTTCGCGAATTGCGCAACGTCGTGGAGCGCCTCGTCTTGCTTGCGTTTGGCGAAGCCATCAGCGCTGCCGAGGTTCGTCTGGTGCTCCCATCTTCCGATTCGGTGCGAGGTGGGCCCACATCATCCGCGACGGGTTCAGCGGGCACGCTGGCGGAACGCACCGAAGCGTTCGAAAGGGAAGTGATGCTTGCGGAAATTCGGCGCCACAATTTCCACATGACGAACGTTGCCCGGGCGCTGGGGCTGGAGCGCAGCCACCTCTACAAGAAATGCCAGCAACTGGGAATCGACCTGCAATCGCTGCGCAAGCCCGAGTAG
PROTEIN sequence
Length: 463
LPRKAHLLLVDDDPNTLASLSRAFRLAGHEATVCDNATRALELLRTENFDLILSDVVMPGKNGLELLADLKTARVKTPIVLISGQANIEMAVKATKLGALDFLEKPLSTDKLLVTVENALRLTRLEDENRELRQRLGKHELVGSGPAMEKLMAQIERVAASETRVCILGETGTGKELVARAIHEKSPRCEHPFITLNCAAVPAELIESELFGHEKGAFTGAAVRHLGKFEQADGGTLFLDEIGDMPVVMQAKLLRVLEEGEVERVGGDKPTKVNVRVVVATHRNLEELVKQNAFRPDLFHRIYVFPLALPPLRERPEDFPELVTHFARQVAAQNGWKEKAFAEDAIAELRKYGWPGNVRELRNVVERLVLLAFGEAISAAEVRLVLPSSDSVRGGPTSSATGSAGTLAERTEAFEREVMLAEIRRHNFHMTNVARALGLERSHLYKKCQQLGIDLQSLRKPE*