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13_1_40cm_4_scaffold_65_4

Organism: 13_1_40CM_4_Acidobacteria_58_4

partial RP 36 / 55 MC: 12 BSCG 38 / 51 MC: 11 ASCG 11 / 38 MC: 5
Location: comp(2005..3222)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein Tax=RBG_16_Chloroflexi_64_43_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 416.0
  • Bit_score: 400
  • Evalue 3.10e-108
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein id=12556214 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 410.0
  • Bit_score: 399
  • Evalue 5.00e-108
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 320.0
  • Bit_score: 332
  • Evalue 2.10e-88

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Taxonomy

RBG_16_Chloroflexi_64_43_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1218
GTGACCCCGCCCGTCATTCACGCCGAATCCCTCTCCAAGCGCTACCGTCGCGGCGCTCTCCAGCAAACCACGCTCCTGCGCGATCATTTGAGCAGGGCGCTGAAATCACCGCTGTCGGTTTTCCGCCGCCCCAAAGACGAAACCTTCTGGGCCCTCAAGGACGTCTCCCTCGACGTTCGCGAAGGCGAAGTCCTCGGCCTCATCGGCCGCAACGGCGCTGGCAAGACCACGCTCCTCAAAATCCTCTCCCGCATCACGCGCCCCACCCAAGGCTGGGCCGAGATTCACGGCCGCGTCGGCTCGCTCCTCGAAGTCGGCACCGGCTTCCATCCCGAGCTCACCGGCCGCGAAAACACCTTCCTCTCCGGCGCCATCCTGGGCATGTCCCGCAGCGAAATCACTCGCAAATTCGACGAAATCGTCGCCTTCGCCGAGCTCGAAAAATTCATTGACACCCCCGTCAAGCACTACTCCTCCGGCATGTACGTCCGCCTGGCCTTCGCCGTCGCCGCCCATCTCGAGCCGGAAATCCTCCTCGTCGACGAAGTCCTCGCCGTCGGCGACATCAACTTCCAGAAAAAATGCCTCGGCAAGATGGGCGACGTCGCCCGCGCCGGCCGCACCGTCGTCCTCGTCTCCCATCAACTCAACCAGATTCGCCGCCTCTGCCACCGCGTCATTTGGATCGACGACGGCCACGTCCGCCAGAACGGCCCCACTCACGAAGTCACCTCCGCCTACGAATCCGCCATGGCCCGCGGCGAAACGAACGGCCATTCGCAGGAGCGCGGCAGCTCCATCAAGGGCCGTTTCCTGCGATGGGAAATCAGCCAGCCCCGGGGAGATGGCCCGCATATTCTGAACGGCCTCGGACCAGTGACCGTCAAATTTACGGCCGACATCCGGCAGCCCATCAAAATGGGCCACTACGGAGTCGCCTTGCGTAATCACGAGCAACAGGTGATCTGGGCTTGGGCTGTGCAACCTTTGCGACTGGAGATTGGGGAACGCGAACTTTCCCATACGTTTCCGATGCTCCCTCTTCGACCTGGACCTTACACATGGCTTGCCGCATTGTACGAAGAGGGAGACTTAGTCGACTGGTGGGACTGCGTGCCGGAGATGATCGTGGCCACAGAAGTTCACCAACATCCGCAAGAAGAATGGAACGCGATCTTGAATATCCCGTCGCGTTTTGAAGTTGACGGAAGGAGATAG
PROTEIN sequence
Length: 406
VTPPVIHAESLSKRYRRGALQQTTLLRDHLSRALKSPLSVFRRPKDETFWALKDVSLDVREGEVLGLIGRNGAGKTTLLKILSRITRPTQGWAEIHGRVGSLLEVGTGFHPELTGRENTFLSGAILGMSRSEITRKFDEIVAFAELEKFIDTPVKHYSSGMYVRLAFAVAAHLEPEILLVDEVLAVGDINFQKKCLGKMGDVARAGRTVVLVSHQLNQIRRLCHRVIWIDDGHVRQNGPTHEVTSAYESAMARGETNGHSQERGSSIKGRFLRWEISQPRGDGPHILNGLGPVTVKFTADIRQPIKMGHYGVALRNHEQQVIWAWAVQPLRLEIGERELSHTFPMLPLRPGPYTWLAALYEEGDLVDWWDCVPEMIVATEVHQHPQEEWNAILNIPSRFEVDGRR*