ggKbase home page

13_1_40cm_2_scaffold_230_1

Organism: 13_1_40CM_2_Archaea_39_4

partial RP 7 / 55 MC: 1 BSCG 3 / 51 ASCG 18 / 38 MC: 1
Location: 136..1209

Top 3 Functional Annotations

Value Algorithm Source
cas; CRISPR-associated endonuclease Cas1 (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 340.0
  • Bit_score: 419
  • Evalue 8.90e-115
  • rbh
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilacea similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 340.0
  • Bit_score: 419
  • Evalue 4.40e-114
CRISPR-associated protein Cas1 n=1 Tax=Nitrosopumilus sp. AR RepID=UPI00037CA3E1 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 355.0
  • Bit_score: 376
  • Evalue 2.30e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrosopumilus sp. NF5 → Nitrosopumilus → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1074
TTGACCCTCAAAGGCAAACAAAATCACTACAACGTAAAATTTCTCTCAGGCTACGGATTATCCGTATCTCTCAAAGATAACAAAATTGTTCTAAAGAACGGGACTTATCCTTATTCTGATTCCCAAGAACAAGAAGAATGGTTCATCACGAAATTGCCTTACGAAAAGATTGTCATTTCTGGCAAGGGTTACCTCTCTACAAAGGCACTTGCCTTACTTAATGAAAACAACCGAAATGTAATCATCACAAACTCTCAAGGTAAGCCTCTCTCACTAGTGTGTGGATTAATGGACTCAATGACCGCTACGAGATACCGCATGGGTCAGTATGACACCTTTAGAGATCCTGAAAAGTGTAAGTATCTTACAAGGTGGATTCTAAGACAGAAGATAGAATCACAGATTAGGTTTCTAGAATCTCTTTCCAAAGATGATTCTAAGCCAATAATAGATAGACTAAGAAGTTGTCTAAATCAAGTTGAAAGTTCCTTGGAACCGTACAAAATAGAATCAAGCGCTGGTCAAGTCTATTTCAAATATTATGCAACTTTGTTTGATCCAAGCCACAAATTTGAATCAAGAAATAATTCATCCCTTAGAATCACAAAGAGAAATGCAAGCGACCCGATCAATGCCTTACTGAATTACGGCTTTGCTGTTCTCGCAGGAGAGATTTACAAGTTCATCAATGGTATAGGGCTAGATGCTTACTTTGGATTCAATCACCATTCCCATACTGGTTTTCAACCGCTCGTTTATGACATCATTGAACCGTTTAGGTGGCTTGTCGAAAAGGCAGTATATCACGTTGCAAATACAGATGATTGGAGACATAAGTTACTGTTCAAGGATTATGCATGGACGAAAGATGGTCAGGTAGTGCTAAGTGATAGAATAAAGAAGAACTTTCTTGAGAGGTTGGAAAGAGAGTTTCAGAAGGAAAGGGAATGTGATTTCAAGCATGGCAGAATGAAGGAAAACGGAATGTCGATGTGTCAGGAGATTACGATAGCTAAGATTGCAGTTCAGAATCTTGCCCAGTATTGTATTCAGGAGAAATACTACCATATTTAA
PROTEIN sequence
Length: 358
LTLKGKQNHYNVKFLSGYGLSVSLKDNKIVLKNGTYPYSDSQEQEEWFITKLPYEKIVISGKGYLSTKALALLNENNRNVIITNSQGKPLSLVCGLMDSMTATRYRMGQYDTFRDPEKCKYLTRWILRQKIESQIRFLESLSKDDSKPIIDRLRSCLNQVESSLEPYKIESSAGQVYFKYYATLFDPSHKFESRNNSSLRITKRNASDPINALLNYGFAVLAGEIYKFINGIGLDAYFGFNHHSHTGFQPLVYDIIEPFRWLVEKAVYHVANTDDWRHKLLFKDYAWTKDGQVVLSDRIKKNFLERLEREFQKERECDFKHGRMKENGMSMCQEITIAKIAVQNLAQYCIQEKYYHI*