ggKbase home page

13_1_40cm_2_scaffold_95951_2

Organism: 13_1_40CM_2_Thaumarchaeota_39_13_2

partial RP 7 / 55 BSCG 4 / 51 ASCG 18 / 38 MC: 1
Location: 668..1222

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein (Consists of S1 domain and a Zn-ribbon domain)-like protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYN9_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 181.0
  • Bit_score: 205
  • Evalue 4.80e-50
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 181.0
  • Bit_score: 204
  • Evalue 1.50e-49
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 181.0
  • Bit_score: 200
  • Evalue 3.30e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrosoarchaeum koreensis → Candidatus Nitrosoarchaeum → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 555
TTGTCACAAAAACCAACTCTTCCAGGCGATAAAGTTGCTATAATTGAAGAATTTGAAACTGGTGCAAATACGTTTGATGACGGTCAGTCTATAATATCAGCAGTAATTGGAATGCCAGAGTTCGATAAAGCAAACCGCATTGCAAAAATCAGCGAAATGAAGAAACCTGCAGTTCCAAAGGTAGGTGACGTAATAATAGGAAATGTCTCAGCTCTTATGAACAACATGTTTGCGATAAGCATGTTGTACATAAACGGCAAGCCTACTCACTCTGGTCTTGAATGCATAATCCAAGCAAAAGGGGCAAAGAAAAGAATTCTTGCAAGGGTAAGTGATATTACCATGGCAAAGATGATTAGCTTGAAAAACGGAGTGATACATGCCACGATTAATGAACCTGAGCTTGGAGTTCTATTTACACAATGCAACAAGTGCGCTGGCAAGGTGGTATCACTTGGCAGCAATGTAAAGTGTGTAGATTGCGGATATATCGAAGAGAGAAAATTATCAACCAAATTCGGAAACAGCGATTTTATAAAATTCAGTTCCAACTAA
PROTEIN sequence
Length: 185
LSQKPTLPGDKVAIIEEFETGANTFDDGQSIISAVIGMPEFDKANRIAKISEMKKPAVPKVGDVIIGNVSALMNNMFAISMLYINGKPTHSGLECIIQAKGAKKRILARVSDITMAKMISLKNGVIHATINEPELGVLFTQCNKCAGKVVSLGSNVKCVDCGYIEERKLSTKFGNSDFIKFSSN*