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13_1_40cm_2_scaffold_158406_3

Organism: 13_1_40CM_2_Gemmatimonadetes_60_3

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(981..1505)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC29_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 164.0
  • Bit_score: 234
  • Evalue 9.10e-59
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 164.0
  • Bit_score: 234
  • Evalue 2.60e-59
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH40056.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantia similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 164.0
  • Bit_score: 234
  • Evalue 1.30e-58

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGCAGCGGCTTTGGTCGCAGCACGCGCCCCATATCGACGCGGTTGTTCGGCGGTTATGTGGCGATGCCGAGCTGGCCGCCGACGTCTCCCAGGAAGTTTGGATGCAGATCTTCAGGGCTCTGCCAAGCTACCGTGGTGACTCGCAGTTCGGAACATGGGCCCACCGCATCGCGGTGAACCGTACTCTGAATGCGCTGCGCAAAATAAGACGGCTCGCAAAGCTGGAAACCGAGATCGAGGACGACTCCGCGATGACGGAGATGGAAACGGACCGGACGTTCATGGCGGAATCGATCGAGCAGGCGATGAACAAGCTGTCTCCGGGAGCCAGAACGGTGTTCGTCCTTCACGACATTGAAGGGTACACGCACGGGGAGATTGGGGAGGAGCTCGGAATCACGCCGGGCGGATCGAAATCGCAATTGTTCAAGGCGCGCGCGAAGCTGCGCAAGCTCCTCGCGCACCTGGTAGATGAATCACCAACTATCGCAGGAAAGGGGAAGGGACATGTCGCATCTGTCTGA
PROTEIN sequence
Length: 175
MQRLWSQHAPHIDAVVRRLCGDAELAADVSQEVWMQIFRALPSYRGDSQFGTWAHRIAVNRTLNALRKIRRLAKLETEIEDDSAMTEMETDRTFMAESIEQAMNKLSPGARTVFVLHDIEGYTHGEIGEELGITPGGSKSQLFKARAKLRKLLAHLVDESPTIAGKGKGHVASV*