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13_1_40cm_2_scaffold_188197_1

Organism: 13_1_40CM_2_Gemmatimonadetes_60_3

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: 2..583

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 193.0
  • Bit_score: 322
  • Evalue 2.80e-85
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 193.0
  • Bit_score: 357
  • Evalue 2.90e-96
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:AHG90787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 193.0
  • Bit_score: 357
  • Evalue 1.50e-95

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 582
CACGTCTTCCTCAACGACGCCAACCTTCCACGCCTCAAGTTGAGCCGCGCTTACCAGGAGATCGCGCGCGATAAGAAAAAGTTCGACGGCGAGAACAAGGAGTTTATCTCGAACAAGCTGAATTCCGCGAACTGGATGATCCAGGCGATCGAGCAACGTCGACAAACGATGCTCAAGGTTATGAACTACATCGTGGAGCGGCAGCGGGAGTTTTTCGAGAAGGGAATCCAGTACCTCAAGCCGCTGACGCTCCGTGAGGTCGCGGAAGTGATCAACATGCACGAGTCCACGGTCAGCAGAGTGACGAATGAGAAATTCGTCCAGACGCCGCGCGGCGTTCTGCCGCTGAAGTTTTTCTTCTCGTCCGGTCTCGCTACCTCTGACGGCGAAGATGTCTCCGCTCGCGGCATCAAGGCGCAGCTTCAAAAACTCGTTCAGGAAGAGGACCCCAAGCACCCGCTCACGGACCAGGCGATCGTCAACATTCTTCGCGAGAGCGGCGTCCAGATCGCGCGCCGCACCGTCGCCAAGTATCGCGATCAGCTCGGTGTGCTCTCAGCCCGGATGCGCAAGCGGGTATGA
PROTEIN sequence
Length: 194
HVFLNDANLPRLKLSRAYQEIARDKKKFDGENKEFISNKLNSANWMIQAIEQRRQTMLKVMNYIVERQREFFEKGIQYLKPLTLREVAEVINMHESTVSRVTNEKFVQTPRGVLPLKFFFSSGLATSDGEDVSARGIKAQLQKLVQEEDPKHPLTDQAIVNILRESGVQIARRTVAKYRDQLGVLSARMRKRV*