ggKbase home page

13_1_40cm_2_scaffold_223615_1

Organism: 13_1_40CM_2_Gemmatimonadetes_60_3

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: 38..1024

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJH6_IGNAJ similarity UNIREF
DB: UNIREF100
  • Identity: 25.8
  • Coverage: 275.0
  • Bit_score: 102
  • Evalue 1.00e-18
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 319.0
  • Bit_score: 145
  • Evalue 3.00e-32
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG91029.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 319.0
  • Bit_score: 145
  • Evalue 1.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 987
ATGACCCTCAAAGGGCTCTTCGCGTCCTTCCGGTGGTTGCTCGGCGCACTTCCAGACGATGTCCGACGGGCCGTGGTCGTCGCCATCCGCTGCGCTCCAGTCTCGGCTGCCGTCGGCGCCGCTATCGCCTTTTTGTGGCCCAACCATTATCTGAGCACCGCGTCGTTCGTTGCGGAGAGCCGGAACGTGCGCGCCCTCCCGTCCGCCCTCGGCGCCCTCGCGGATCAGTTCGGCGTCGCAGCCGGCGCAGGCGGGGGTCAGTCCCCCGCGTTCTTTGCAGACCTGCTCGAAAGCCGCGCTATTCTGATGCCGATCCTCTCAATGTCGACGTCGACCTCTGCCGGGGACCATCCCAAACCCCTCCTAGATCGCCTTGACGTCGGGGATCCGCGGCGAATAGACCGTCAAGAGCGAGGCCTCGGGAAGCTCCGCAACATGCTCACCGTGACTCCGGACGCAAAGACGAACGTGGTAACCCTTGGGGTTGACGCACGGGACCCTGAGGTAGCCTATCAGATTGCTAGTGCACTACTGAAGAATCTTGATGAGTTCAACGTAACCGTGCGTCGATCCAGAGCGAGGAACGAACGGGAGTTCTTAGAGGCCCGCGTGTCCGAGGCTCAGACTGACCTGCAGAGTGCGGAGCGTGAGCTGGAGCAGTTTCTGAGCGCTAATCGTGCCGATACGCGCTCCTCGCCCTCACTCGCATTCCGCGAAGCTCGTCTCAGAAGAAACGTAGATCTCGCACAGACGCGCTTTGTCGAGCTCCAACGTCAACTCGACCAAGCTCGGATCCAAGAGGTACGGGACACTCCCGTAATCACCGTCCTCGACAAGCCCAACTTGCCGGAGCGGCACTATAGGCCGCGTCGCGCCCTCGTCGTCGTCGTGGTGCTCTTACTCGGCATGCTGGGAGCCTACGCAGTCTCAAGGTTGACTGGAAGCCTCACTCAGAAAAGTCTCCTCGCCAGTCCTGCTCGCTGTTGA
PROTEIN sequence
Length: 329
MTLKGLFASFRWLLGALPDDVRRAVVVAIRCAPVSAAVGAAIAFLWPNHYLSTASFVAESRNVRALPSALGALADQFGVAAGAGGGQSPAFFADLLESRAILMPILSMSTSTSAGDHPKPLLDRLDVGDPRRIDRQERGLGKLRNMLTVTPDAKTNVVTLGVDARDPEVAYQIASALLKNLDEFNVTVRRSRARNEREFLEARVSEAQTDLQSAERELEQFLSANRADTRSSPSLAFREARLRRNVDLAQTRFVELQRQLDQARIQEVRDTPVITVLDKPNLPERHYRPRRALVVVVVLLLGMLGAYAVSRLTGSLTQKSLLASPARC*