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13_1_40cm_2_scaffold_329511_2

Organism: 13_1_40CM_2_Gemmatimonadetes_60_3

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(298..1050)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 200.0
  • Bit_score: 129
  • Evalue 6.40e-27
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 210.0
  • Bit_score: 108
  • Evalue 3.10e-21
Lipopolysaccharide biosynthesis protein id=7202372 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 similarity UNIREF
DB: UNIREF100
  • Identity: 28.1
  • Coverage: 217.0
  • Bit_score: 91
  • Evalue 1.10e-15

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 753
GCGATGCTTCAAACATTGTTTTCCGATGATCGGTACTCCCCACCCACTCAACGGGAGCTGTTGGACATCTTGCGCGTAAAGGGCAAGACATCCAGAGAGCGACTTGGAAAGGGCGTTCGCAAACTGGAGGGATTGGTTCACGCTAGTTTCAGCACCAGGACTGATATCGTTACACTCGATGTCGATGGACCTACTGCGCAGCTTGCAGCGGACATGGCCAATCGGATGGTGCAACTCCTGGACAGCTTTAACATTGTGAGACGACAATATCAGTCGCGAGAGCTGAGGCGCTTTGCGGGTGAGAGACTCGCCGAGGCTCAGCGGGAGCTGCGCGCAGCGGAGGACAGCAATCTACGCTTTCTCCAGGTTAATCGACGTTTCACGGACTCACCGGTGCTGGTGTTTCAAGCCAAGCGATTGGAGCGCGAGGTAGACCTTCGCCAGGAAATCGTTCTAACGCTTGCCCGCGAGTACGAGGAGGCACGGATAGCCGAGCATCGGGATGTGCCCTTGTTGAGCATGATTGATCCTGCGAGACCGCCGTACAGGAAGAGCTCGCCACGCATCCTGCTGTACAGTCTCATCGCGATCTTTGTCAGTGGCGTGGTCGTTGTCCTCTTCACGTATGGTCGCGCCATGTGGGCACGTGAGGCCGACGAGGACCCAGCTTCGCATGAGGCTCTGGCGAGGGCTTGGCCTTCATTCCTTCTGAAGATCGGGCACGCAATCAGTCGCAAGTCATCCGGGGTTTGA
PROTEIN sequence
Length: 251
AMLQTLFSDDRYSPPTQRELLDILRVKGKTSRERLGKGVRKLEGLVHASFSTRTDIVTLDVDGPTAQLAADMANRMVQLLDSFNIVRRQYQSRELRRFAGERLAEAQRELRAAEDSNLRFLQVNRRFTDSPVLVFQAKRLEREVDLRQEIVLTLAREYEEARIAEHRDVPLLSMIDPARPPYRKSSPRILLYSLIAIFVSGVVVVLFTYGRAMWAREADEDPASHEALARAWPSFLLKIGHAISRKSSGV*