ggKbase home page

13_1_40cm_3_scaffold_129943_1

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: comp(3..401)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0II96_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 231
  • Evalue 4.50e-58
R-protein S3p {ECO:0000313|EMBL:ADK25996.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidat similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 133.0
  • Bit_score: 258
  • Evalue 4.80e-66
rps3p; 30S ribosomal protein S3p similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 119.0
  • Bit_score: 231
  • Evalue 1.30e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 399
ATGAGCGCAGTCAAGAACGTGATCAAGAACAACTTCCGCAACATGGAGCTCAACGAGTTCCTTGCCACAGCTCTCAAAGATGCCGGCTATGGCGGGGTTGAAGTGCAAAAAACTCCTGTTGGTGCAAGAATAACCGTCTACGTCACAAGGCCGGGTCTCGTCATTGGCAGGAAGGGGATAGGGATCAAGGATCTTATGACAAAGATAGAGCAAAAATTCGGCCTTCAGAACCCACAGATTTCGGTGCTTGAGGTTACCAATCCTGAACTGAACCCACACATCATGTGCAACAGGATTGCGCAGCTCATCGAGCGCGGGACCGCGTTCAGGCGTGCAGCCATGTGGTCGCTCAACACAATAATGAACGCCGGTGCACTTGGTGTTGAAGTTGTGATTTCT
PROTEIN sequence
Length: 133
MSAVKNVIKNNFRNMELNEFLATALKDAGYGGVEVQKTPVGARITVYVTRPGLVIGRKGIGIKDLMTKIEQKFGLQNPQISVLEVTNPELNPHIMCNRIAQLIERGTAFRRAAMWSLNTIMNAGALGVEVVIS