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SCNpilot_BF_INOC_scaffold_2341_12

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(8526..9050)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 factor-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0I9_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 187.0
  • Bit_score: 272
  • Evalue 3.00e-70
RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 187.0
  • Bit_score: 271
  • Evalue 1.90e-70
RNA polymerase sigma-24 factor-like protein {ECO:0000313|EMBL:AEG93395.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 187.0
  • Bit_score: 271
  • Evalue 9.40e-70

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
TTGGCCACCGATCAGGAACTCTCCGACTTTCTGCGCAACGTCGAAAAGCGGGCGTTCAAGCGGACCGTCTACCACATGATGAAGCTGGCCGAGCATTACGGTGGCAAGCCGGCGGCCGAATTGCCGCTGCTGTTCCAGCGCATCCTGTCCAACAGCACGCTGGACTGGTTTCGGCGGCAGAAGACGCGCAACGCGCTATTTTCCAACCTGAGCGACTTTGAAGCCGAGGACGGCGAGGGCGAATTCGACCTGCTGGAGATCTTCGCCGGCGCCAACGACAGCGCCCAGATCGAGAGCGCGGAGGACTCCACCCGGCGCGCCCAGGTGCTGCGCGAGATCGAGTTACAAATCCAGGCCCTGCCCAACCGTCAACGCGAGGCGTTTCTGCTGCGTTACTGGGAGGAAATGGATGTTGCCGAAACGGCGGCGGTCATGGGGTGTTCGGAAGGCAGTGTCAAGACGCACTGTTCGCGCGCAGTCCAGGCGCTGGCGAAGGCCTTGAGAGCCAAAGGAATCCAGCCATGA
PROTEIN sequence
Length: 175
LATDQELSDFLRNVEKRAFKRTVYHMMKLAEHYGGKPAAELPLLFQRILSNSTLDWFRRQKTRNALFSNLSDFEAEDGEGEFDLLEIFAGANDSAQIESAEDSTRRAQVLREIELQIQALPNRQREAFLLRYWEEMDVAETAAVMGCSEGSVKTHCSRAVQALAKALRAKGIQP*