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SCNpilot_BF_INOC_scaffold_535_27

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28722..29462)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CUU9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 228.0
  • Bit_score: 369
  • Evalue 2.00e-99
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 230.0
  • Bit_score: 369
  • Evalue 7.20e-100
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL78974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 228.0
  • Bit_score: 369
  • Evalue 2.80e-99

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
GTGCGCGTGAGATGTTCGAGCAACCCAANNNNNNNNNNNNNNNNNNCCGCCACGCCGCGCCTGGTCAAGGAAAAGGGCGCCAAGAAGGCCTGTGCGATCTATCAGGACGACGAGTTCGGGCTGGAGGTGCTGCGCGGCGCCGAGGATGGCCTGAAGACCATCGGCATGGAACTGGCCGAGAAGACCAGCTACAAGCGTGGCGCCACCGACTTCTCCTCGCAGGTGGCCAAGATGAAGGCCGCCGGCTGCGATTTCGTGGTGCTGGGCACGGTGATTCGCGAGACCATCGGCACCATTGCCGAGTCGCGCAAGACCGGCTTCAGCCCCACCTTCCTGGGCACCACGGCCGCTTACACCGATCTGGTCCACAAGCTGGGCGGCAAGGCCATGGACGGCTTGTACGCCACCATGGCGGTGCAGGTGCCGTATCTGGACGAGGCCTCGCAGCCGATCCGCTTCTGGGCCAACAAGTACAAGACCAAGTTCAACGAGGATCCCGGCGTGTTCTCGGTCTACGGCTATGAAATCATGGACAACTTCATCCAGGGCGCGCAGCGTGCCGGTGCCAACCTGAGCACCGACAGCTTCATCAAGGCCATGGACAGCGCGGCGATCCAGCCCGACATGTTCGGCAGCGACATCATGAAGTTCAGCGCCACCAACCGGCTGGGCACGGATCGCTCGCGCCTGTCGCAGATCCAGGACGGCCGCTGGAAGGTGGTGTCGGACTACTTCAAGTAA
PROTEIN sequence
Length: 247
VRVRCSSNPXXXXXXXATPRLVKEKGAKKACAIYQDDEFGLEVLRGAEDGLKTIGMELAEKTSYKRGATDFSSQVAKMKAAGCDFVVLGTVIRETIGTIAESRKTGFSPTFLGTTAAYTDLVHKLGGKAMDGLYATMAVQVPYLDEASQPIRFWANKYKTKFNEDPGVFSVYGYEIMDNFIQGAQRAGANLSTDSFIKAMDSAAIQPDMFGSDIMKFSATNRLGTDRSRLSQIQDGRWKVVSDYFK*