ggKbase home page

SCNpilot_BF_INOC_scaffold_1221_16

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 18674..19627

Top 3 Functional Annotations

Value Algorithm Source
Toprim domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DTN9_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 322.0
  • Bit_score: 363
  • Evalue 3.10e-97
Toprim domain protein {ECO:0000313|EMBL:ERJ00241.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VP similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 322.0
  • Bit_score: 363
  • Evalue 4.30e-97
topoisomerase similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 327.0
  • Bit_score: 351
  • Evalue 2.60e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 954
ATGCCATATGTCGAACCTGATGCAATTATACGGGCAAAGCAGGTCGATCTTTTATCCTATATGAAAAGCTGTGAGCCGGACAATTTGGTTCATATCAAGGGTGACAACTACTGTACAAAAGAACATGACAGTCTAAAAATTTCAAACGGAAAATGGTGTTGGTGGTCGCGTGGCATTGGAGGTAAATCGGCGCTCGACTACCTTATCAAAGTAAAAGGATACAGCTTTACTGACGCTGTGGAACAAATTATCGGGCAGACGATCATCAAACCGTCTGCCCATTTTCCTGCCCCAAAACAAGAGAAAAAGCTGCTGCTTCCTGATCTTTGCGCGTATCCAAAAAACGCAAAGGACTATCTCTTATCCCGTGGAATTGATGAAGAAATCATTGATTATTGTATAAAGAACGGCAGCATTCGGGAGGATGACCGATACCACAATGTGTTGTTTATGGGCTTTGATAAGTCCGAAAAAGCGCGTTACTGTGCAATCCGTTCCACAGTAGGTAATTTCAAAATTGATGCAACAGGCAGTGACAAGCATTATTCCTTTAAACTCTTTTCAAGAGAACCGAAAAACACACTGCATTTATTTGAAAGTGCAATAGACTTGCTTTCATATGCCACTCTTTTAAAACGCAAAAAGAACGATTGGAGAAGTGAAAACCTACTATCTCTTGCAGGGGTTTATCAACCGCAAAAGGATATAAAGCAGAGTAAAGTTCCGGTGGCATTAAATCAATATCTTGAAGATTATCCTCATATCCGAACAGTTATATTCCACCTTGATAATGATAGAGCCGGACAGTTGGCATCACAAGCAATACGAACGGTTTTGCCACCCGAATACGAAACTATTGATGCTCCTCCCCCTGCCGGTAAGGACTGCAATGACTATCTTTTAACCCGGCTCGGTGAGTGCAATAAAATCAAAGAAAGGAGTGATGCACGGTGA
PROTEIN sequence
Length: 318
MPYVEPDAIIRAKQVDLLSYMKSCEPDNLVHIKGDNYCTKEHDSLKISNGKWCWWSRGIGGKSALDYLIKVKGYSFTDAVEQIIGQTIIKPSAHFPAPKQEKKLLLPDLCAYPKNAKDYLLSRGIDEEIIDYCIKNGSIREDDRYHNVLFMGFDKSEKARYCAIRSTVGNFKIDATGSDKHYSFKLFSREPKNTLHLFESAIDLLSYATLLKRKKNDWRSENLLSLAGVYQPQKDIKQSKVPVALNQYLEDYPHIRTVIFHLDNDRAGQLASQAIRTVLPPEYETIDAPPPAGKDCNDYLLTRLGECNKIKERSDAR*