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SCNpilot_BF_INOC_scaffold_1617_15

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 16453..16965

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=537013 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 165.0
  • Bit_score: 122
  • Evalue 5.30e-25
2'-5' RNA ligase (EC:6.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 158.0
  • Bit_score: 104
  • Evalue 3.00e-20
2'-5' RNA ligase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 165.0
  • Bit_score: 122
  • Evalue 3.80e-25

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 513
ATGGAAAAATTAATTGGCTTGATCCATCAAGTCAAACAAAACAGCACAAAGGGAAGCTTTACAAGACAGGAAAATCTTCATGTAACCCTTGCTTTTCTGGGAGAAACAAATGCCGAAAAAATTGATCTGATCAAGGCATGTATGGACACATCCTGCCTGAGTGATCCTTTGATTCTCACTGTGAAGGGCATTGACAGGTTTCATAGTGTAACGGGCGATCTCGTCTTTGCGTCTGTGAACCCCAGCAAGGATTTACTGGATTTACAAATATGTCTGGAAAGCGAATTGAGAAAATCGGGTTTTCCTCTGGAGCAGAGGACGTTTCGGCCCCATATCACATTGGGGCGCAACGTGGTTTTTTCCGAAAGCTTTGACAAAGCCAAGACCAAAATGGAATTTGAGGAACTAAACGAGCGGATAGAAAAGCTTGTTTTGATGAAAAGTGAAAGAATCGGCGGTAAACTGACCTACACGCCTGTTTATGAAGCGAAATTGAGGGATATGACAGCATGA
PROTEIN sequence
Length: 171
MEKLIGLIHQVKQNSTKGSFTRQENLHVTLAFLGETNAEKIDLIKACMDTSCLSDPLILTVKGIDRFHSVTGDLVFASVNPSKDLLDLQICLESELRKSGFPLEQRTFRPHITLGRNVVFSESFDKAKTKMEFEELNERIEKLVLMKSERIGGKLTYTPVYEAKLRDMTA*