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SCNpilot_BF_INOC_scaffold_1942_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3859..4134

Top 3 Functional Annotations

Value Algorithm Source
Putative integration host factor, beta subunit n=1 Tax=Selenomonas sp. CM52 RepID=J6I762_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 91.0
  • Bit_score: 134
  • Evalue 5.20e-29
Putative integration host factor, beta subunit {ECO:0000313|EMBL:EJU28873.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Seleno similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 91.0
  • Bit_score: 134
  • Evalue 7.20e-29
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 4.70e-28

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Taxonomy

Selenomonas sp. CM52 → Selenomonas → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 276
ATGAACAAAACAGAATTAGTCGCAGCCGTTGCTGAAAAAGCCGGTCTATCTAAAAAGGATGCAGATACCGCGGTATCTGCAGTAGTTGACGCCCTTACCTCAGCATTGGTAAGCGGAGACAAAGTACAGCTGGTCGGCTTCGGAACCTTTGAGGTTCGCTCACGCAGCGCAAGAGAGGGCTTAAACCCCCAGACAAAACAAAAAATCCAAATCGCTGCTTCCAAATCTCCCGTTTTCAAAGCCGGCAAAGCTTTGAAAGATGCTGTCAACAAATAA
PROTEIN sequence
Length: 92
MNKTELVAAVAEKAGLSKKDADTAVSAVVDALTSALVSGDKVQLVGFGTFEVRSRSAREGLNPQTKQKIQIAASKSPVFKAGKALKDAVNK*