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SCNpilot_BF_INOC_scaffold_1942_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 8548..9057

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVD6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 165
  • Evalue 3.90e-38
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDA76799.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 165
  • Evalue 5.40e-38
ribosomal protein S30P similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 153.0
  • Bit_score: 159
  • Evalue 7.80e-37

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Taxonomy

Clostridium sp. CAG:242 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 510
ATGAAAAACACATTTACAGCCAGAAANNNACACGCGGAGGGAAAATTAAAAAAACTTGAAAAATTTTTTACTGAGAATGCAGAATCACATGTTACTGTTACTCACGAAAAAGACAGATTTGTCGTTGAGTTAACCATAAAAGAATCCCATATGATCGTCCGCTCTGAGGATACCGGCAGTGACCTGATCGACACCTTTGACAATGTAATTGACAGTATCATCCGTAAAATCAGAAAAAACAAAACGCGTCTTGAAAAAAGAATGCGCTCTGCCAATATAACCGCACCTGCCTATCCGGAATTTGCTCAGGATGAAACCGAGGATGAGTATAACATTGTCCGCAGCAAAAAGTTCAGCATCAAACCGCTGGATGTTGAAGAAGCGATCATGCAGATGAATTTAATCGGACACCAGTTTTTTGTATTCACCAATGTCACAACCGGCGATTTGAATGTAGTATACCGCCGTCACAACGGCGACTACGGTCTCATTGAGCCAAACAATAACTGA
PROTEIN sequence
Length: 170
MKNTFTARXXHAEGKLKKLEKFFTENAESHVTVTHEKDRFVVELTIKESHMIVRSEDTGSDLIDTFDNVIDSIIRKIRKNKTRLEKRMRSANITAPAYPEFAQDETEDEYNIVRSKKFSIKPLDVEEAIMQMNLIGHQFFVFTNVTTGDLNVVYRRHNGDYGLIEPNNN*