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SCNpilot_BF_INOC_scaffold_2597_13

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 11812..12702

Top 3 Functional Annotations

Value Algorithm Source
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Clostridium thermocellum JW20 RepID=D1NR89_CLOTM similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 297.0
  • Bit_score: 313
  • Evalue 2.60e-82
(NiFe) hydrogenase maturation protein HypF similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 297.0
  • Bit_score: 313
  • Evalue 5.70e-83
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:ABN54212.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 297.0
  • Bit_score: 313
  • Evalue 2.80e-82

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 891
GTGCAAGGCATCGGGTTCAGACCCTTTGTTGCCCGGACGGCAAAACAACATCACATCACAGGCACTGTGCGGAATCTCGGAGGTATGGTAGAAATCCATGCGTGCTCCGATATCGCCGCATTCAGTGCTTTTTTTGCGTGTCTTTCCGGCTGTTCCCTGGCAGGTGCACAAATCGTAAAAATGGAAACCGAGGACACCGACCCCTTTGATACGGACGGATTTTCGATTCTCGACAGCGACGACACCCGAAACGGTCTGATCATGCTGCCGGCGGATTTGCCGGTTTGCGAGGATTGTCTCGCTGAGTTAACGGACCCCAACAGCCGCAGATACGGGCATCCCTTTAACAGCTGTGCGTCCTGCGGTCCCCGATACAGCATCATGGAAAGCGTTCCTTATGACAGACCAAACACAACCATGGCGGATTTTGAACTGTGTGAAGACTGTAAACGGGAATACGGTTCTTTGGGCAACCGGCGGCATCATGCCCAGACGATCTCCTGTCATCGCTGCGGACCGTATTTGATTTTTCGGGACGGTGACGGTGAATGTGTCAGAGAGCACGCACTGGAAAAGGCAGTTGATGCACTGCACCAGAATAAAATCATTGCCATCAAAGGGATTGGCGGATATCATCTTTCCTGTAGTCCCTTTGATGAGAAAACGGTGCAGAGCCTACGGGAGCTAAAAGGAAGAGAGACAAAGCCCTTTGCCGTGATGTTCCCCTCTCTGGAGAGCATCCGGGAGCATTGCGATGTAAGCGAAAAGGAAGAGGCACTTTTGCTCTCTCCGGCCCGTCCCATTGTAATCCTGCGACTTATGAACGACAGTGTTCCGCTTGGTGTCAGCGGCGGAACCCTTACCTGCGGCTGCTTTTTGCCATATAAATGA
PROTEIN sequence
Length: 297
VQGIGFRPFVARTAKQHHITGTVRNLGGMVEIHACSDIAAFSAFFACLSGCSLAGAQIVKMETEDTDPFDTDGFSILDSDDTRNGLIMLPADLPVCEDCLAELTDPNSRRYGHPFNSCASCGPRYSIMESVPYDRPNTTMADFELCEDCKREYGSLGNRRHHAQTISCHRCGPYLIFRDGDGECVREHALEKAVDALHQNKIIAIKGIGGYHLSCSPFDEKTVQSLRELKGRETKPFAVMFPSLESIREHCDVSEKEEALLLSPARPIVILRLMNDSVPLGVSGGTLTCGCFLPYK*