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SCNpilot_BF_INOC_scaffold_3203_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(7580..8677)

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DQW0_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 327.0
  • Bit_score: 179
  • Evalue 5.60e-42
putative secreted protein similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 341.0
  • Bit_score: 182
  • Evalue 1.90e-43
Putative secreted protein {ECO:0000313|EMBL:CDZ23613.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 341.0
  • Bit_score: 182
  • Evalue 9.30e-43

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1098
ATGGCTAAAAATAAATACAACGATGAAATTGATTTATCAAGCTATAGCAAAAAATCTGTCCGCAAAAAACATAATTGGTTTCGTATTGCCGTAAATATCATGTTATCGCTGGTGATTGCTGTTTCTTCCTCTTTTCTTGTGGGAATGGCCCTTTTGCAAAATAAAAAGGTCTCCGGAGAAAAGGCAGCCACGAATGATGTTTATGAACCTCCTGTCAAGACGGACAATGCCGATCAGGTCAATATTTTACTCTGCGGTCTGGACAAAAGCGAATCCCTCACGGATATTATTATGGTCATGAGCATCGATACCAAAAGAAAGACCGCTCATATACTTCAAATTCCCCGGGACACATTTGTGGGGTCGGATGTGCCTACAGGAAAGGTCAATGCGGTTTATAACAACGGCAGAAAAGGGGAATCCAAAATCCTTACCCTGGTGCGCCGTCTGAATACCCAATTCGGACTTCCCATCGACTATTACTGCAGCATAACCATTCCCGGTTTCCGAAAAGCCATTGATACCATCGCATTTGAAGAAAAGGAAGCGTTATTGCAAGGCGAATGGGATGATAAAGCCGCACAGCGCTTTACCGAATTAGAAGAAATTATTGCGCACCATGATGGCTATATGGCTGAAGGGTTTGTTCGAAACCGTGCCTCCTATGCCAACGGTGACTTGGGTCGTGTGGCCGCCAACCGTATCTTTTATTCCGCCTTCATCAAGAAAATGCAGGATCTGAATATTGTGGACATCACCAATCTGCTAAATAAATGCTGGGATTTCTTTAAAACAGATATGACCTTTGGCGAACTGTCGGGATTTATTTCTCTTGCACAGGATTTGAAAATGAATAATATTTTTTTCCATGCCATACCCGGTCAGTCCATTACTACAAAACCGGCAGGTATGCACCAGAGCTTATCCTATTTCTCTGTTCATAAAGAAGAATATGTGGATATTTTAAATATGTATATGAGACCTTATGCAACCACGCCAATCTATGTCAAGGATATCGGACTCAAGGAACTGCACACAACCTATAAACCACCCGAGGTGGGCGATGACGGCTCCGCATCCGATTATGTTGAAGAATAA
PROTEIN sequence
Length: 366
MAKNKYNDEIDLSSYSKKSVRKKHNWFRIAVNIMLSLVIAVSSSFLVGMALLQNKKVSGEKAATNDVYEPPVKTDNADQVNILLCGLDKSESLTDIIMVMSIDTKRKTAHILQIPRDTFVGSDVPTGKVNAVYNNGRKGESKILTLVRRLNTQFGLPIDYYCSITIPGFRKAIDTIAFEEKEALLQGEWDDKAAQRFTELEEIIAHHDGYMAEGFVRNRASYANGDLGRVAANRIFYSAFIKKMQDLNIVDITNLLNKCWDFFKTDMTFGELSGFISLAQDLKMNNIFFHAIPGQSITTKPAGMHQSLSYFSVHKEEYVDILNMYMRPYATTPIYVKDIGLKELHTTYKPPEVGDDGSASDYVEE*