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SCNpilot_BF_INOC_scaffold_3888_4

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3926..4585)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GPI4_EUBLK similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 188.0
  • Bit_score: 222
  • Evalue 5.90e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 188.0
  • Bit_score: 222
  • Evalue 1.70e-55
TetR family transcriptional regulator {ECO:0000313|EMBL:ADO38500.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum ( similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 188.0
  • Bit_score: 222
  • Evalue 8.30e-55

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Taxonomy

Eubacterium limosum → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
ATGATGGGGGATCCTTGCGCCTCCTGGGTACAACCGGCACCCCGTCCTGTATCCCAACCACAACGAAAGGATGACCACATTATGTCCGAATCTCTGATTACCAAAAAAGCTTTGTCCTCAGGCTTAAAAAACCTGATGAAGCATACAGGCTTTGATAAAATAACAATTGCCGGTATTACAAAACAATGCGGACTGAACCGCCAGACCTTCTATTACCATTTTCAGGATAAGTATGAACTCCTAAACTGGATTTGCTACAACGAGGTAATCCTCCCTCTTTCCGAAAACCTGACCTTTGACACCTGGGGCGACCGTATTCTGACTATGCTGACAACCATGAAAAATGAGTCTTATTTTTACATCAATACTTTGAAATCATCCGGCGCCAATGAATTCGAGCAGTATTTGCTGTCCTTTGCCAAAGGTTTTTTTGCAGAAATCATTGAAAAGCTGGATTTGAACCACAGTGTGTCCAAAGAAAATGTGGACTTTATTGCTCAATTTTATTCCTTTGGTGTTGTGGGCGTAATCGTCAGCTGGGCAAAAACAGAAATGACGGCAACGCCAGAAAGCTTAACGGAAAAAGTGAAAGCACTGGTAAATGACAGCAAAATGTTTGCGGTAAAACGCTATCTGGACGGAATCAGCACATCAACATAA
PROTEIN sequence
Length: 220
MMGDPCASWVQPAPRPVSQPQRKDDHIMSESLITKKALSSGLKNLMKHTGFDKITIAGITKQCGLNRQTFYYHFQDKYELLNWICYNEVILPLSENLTFDTWGDRILTMLTTMKNESYFYINTLKSSGANEFEQYLLSFAKGFFAEIIEKLDLNHSVSKENVDFIAQFYSFGVVGVIVSWAKTEMTATPESLTEKVKALVNDSKMFAVKRYLDGISTST*