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SCNpilot_BF_INOC_scaffold_3888_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 4805..5713

Top 3 Functional Annotations

Value Algorithm Source
Transporter auxin efflux carrier domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YIW3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 134
  • Evalue 2.20e-28
Transporter auxin efflux carrier domain protein {ECO:0000313|EMBL:CDD31364.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 168.0
  • Bit_score: 134
  • Evalue 3.10e-28
Predicted permeases similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 175.0
  • Bit_score: 112
  • Evalue 2.60e-22

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Taxonomy

Firmicutes bacterium CAG:94 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGCGTATTTCAATACGGACAGACAATTTTTATACAGGTCATCATCATGGCGGTTCTGATGCTTCTCGGTTATGTTCTCACAAGGCGTGGAAAGCTATCCGGGGTGACGGTGAAGGAGCTAACTTCCCTTGTATTCAATGTGGTAACACCTTGTGTGATTGTCAATGCGTTTTTGCGTGTTGATTTTAATATGAAATACATCCAAAACCTGCTGCTTGCAGGCGCGCTTGCACTTTTGTCTCACCTGGCGGGTTTTTTGGCAGGCTTTCTTTTTTATCGGGTGAAACCCTATCATAAGCAGGTGGTATACCGGTTCGGCTCCATGATCAGCAATGCGGCCTTCATGGCGCTACCTTTGGCACAGGCTGTCCTTGACAGTGAGGGCGTTCTGTATGTCAGTATCTATGTGATCATGGTCAACGTCTTCAACTGGACAGTGGGCAGGGCACTGTTCAAAACGGATGAAAAGGTCTCACGAGTGAAAATGCTGTTTAATCCCGGTGTCATCGGCGTGTTGTTCGGCATTTTGGCTCCCCTCAACACTGTCCTACATGGCGGCTATGAACACCCCCCTTGCGATGATTGTTACCGGCTATTATCTCGTGGGAACAAGGATCAAAGCCTGTATCACAGATCCCTTTGCATGGTTGACGGTTCTGTTACGACAGGCCGCACTGCCGATTTTGCTCATGCTTCTTTACCGCTACGCCTTCGGCATCGGCGGCATGCTGCTGATGAGCGCTGTTTTGCCTGTGGCGGCACCCTGTGCTGTGATTGTCATTATGTTCTCGGCGGCCTTCGGGGGCGACGAAAAAACAGCGACTCAGCTGGTTTCATTGTCAACGGTCACCGCGATTCTTTCCATGCCGCTGGTGTTGATTGTCAGTCAGTTGATCAAATAAAGTAA
PROTEIN sequence
Length: 303
MRVFQYGQTIFIQVIIMAVLMLLGYVLTRRGKLSGVTVKELTSLVFNVVTPCVIVNAFLRVDFNMKYIQNLLLAGALALLSHLAGFLAGFLFYRVKPYHKQVVYRFGSMISNAAFMALPLAQAVLDSEGVLYVSIYVIMVNVFNWTVGRALFKTDEKVSRVKMLFNPGVIGVLFGILAPLNTVLHGGYEHPPCDDCYRLLSRGNKDQSLYHRSLCMVDGSVTTGRTADFAHASLPLRLRHRRHAADERCFACGGTLCCDCHYVLGGLRGRRKNSDSAGFIVNGHRDSFHAAGVDCQSVDQIK*