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SCNpilot_BF_INOC_scaffold_582_54

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 48664..49041

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein id=4072864 bin=GWF2_Clostridiales_38_85 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 125.0
  • Bit_score: 109
  • Evalue 1.90e-21
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EHN13410.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium spo similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 104
  • Evalue 1.40e-19
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 117.0
  • Bit_score: 91
  • Evalue 1.90e-16

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 378
ATGAATAAACAATCTTTCGGAAGTTTCGTAAGAGCAAGACGTGAATTGCTTGGCAAATCGCTTAGAAGTGTTGCCGGCGAAATTGATATGGCTCCAGCATACCTGAGTGATATAGAAAAAGGAAATAGATGGCCACCAGTCAAATACCTTGAAAAGTTAGCCGAAGTCCTCTGCATTACACAGGAGGAGCAACTCAGCCACTTTTATGATTTGGCAGGTGAAATTCGCGAGGGGAGCTATCCAGACCTAACCGAGTATATTGGGAAAACCGACATTGCTCGAGTAGCATTACGAAAAGCTAGAGACCACAATATCTCAGAAGAAAAGTGGCAACAGTTTATCGACAAGATAATTACCCCCGAAAAGAAGGGGGATTGA
PROTEIN sequence
Length: 126
MNKQSFGSFVRARRELLGKSLRSVAGEIDMAPAYLSDIEKGNRWPPVKYLEKLAEVLCITQEEQLSHFYDLAGEIREGSYPDLTEYIGKTDIARVALRKARDHNISEEKWQQFIDKIITPEKKGD*