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SCNpilot_BF_INOC_scaffold_235_88

Organism: SCNpilot_BF_INOC_Chimera

partial RP 28 / 55 BSCG 26 / 51 ASCG 5 / 38
Location: 91430..92050

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E84CB6 similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 206.0
  • Bit_score: 379
  • Evalue 2.10e-102
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AHY58151.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 206.0
  • Bit_score: 379
  • Evalue 2.20e-102
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 206.0
  • Bit_score: 376
  • Evalue 5.00e-102

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCCGAGGTTGAAATACCGCAGGAGCTGGATCTGGAGCTGGTCCGGCGCGTGCAGCGCGGCGAAAGCGCGGCGTTCGATGTCCTGGTGCGCAAGTACCAGCACCGCATCGTCGCGCTGATCGGGCGCTACATCGCCGACTGGAGTGAATGTCAGGACGTGGCCCAGGACACTTTCGTCCGCGCCTACCGCGCGATCGGGAATTTCCGTGGCGACGCCCAGTTCTATACCTGGTTGCATCGAATCGCAGTGAATACCGCCAAGAATTACCTTGCCGCGCACAACCGGCGCCCGCCGACCGACGACGTCGATATCGGCGACGCCGAGCAGTTCGACGCCGGCGCGCGCCTGCGCGACACCGACACGCCCGAACGCGAACTGATGCGGCAGGAACTGGAACAGACCGTGATGAAGGCGGTCGACGCGCTTCCCGAGGAGCTGCGTTCGGCCATCACGTTGCGAGAGGTGGAAGGCATGAGCTACGAGGAAATCGCACACAGGATGGGCTGCCCGATCGGCACCGTGCGTTCGCGGATATTCCGTGCCCGCGAGGCCATCGACGTGCAGTTGCGTCCGCTGCTGGATACCGCCAGCGCCACCCGTGAAAGGAGCCGCGCATGA
PROTEIN sequence
Length: 207
MAEVEIPQELDLELVRRVQRGESAAFDVLVRKYQHRIVALIGRYIADWSECQDVAQDTFVRAYRAIGNFRGDAQFYTWLHRIAVNTAKNYLAAHNRRPPTDDVDIGDAEQFDAGARLRDTDTPERELMRQELEQTVMKAVDALPEELRSAITLREVEGMSYEEIAHRMGCPIGTVRSRIFRAREAIDVQLRPLLDTASATRERSRA*