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ACD24_28_3

Organism: ACD24

partial RP 42 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: comp(676..1125)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 142.0
  • Bit_score: 182
  • Evalue 7.60e-44
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=7 to=139 evalue=3.0e-42 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-42
NusB (db=HMMPfam db_id=PF01029 from=11 to=136 evalue=5.6e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.60e-33

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Taxonomy

RBG_16_WWE3_37_10_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAAGCAAAAACTGACCCAAGGCACATTGCCAGAAAATTAGCTTTATGCTCAGTTTTCTGCTGGCTTTTTTCAGATCCCAACCACGAGGAATGCATGAAATTGTCCAGTAATCTGCTGGATCTTGAACCAGGCGACGTAGACCTGGGTTTAACAAACAAAATTGTTGAAGGTGTTACCAACAATTTAAAGGCAATTGACAAAATAATTCAAAAGGCCGCTCCCGAATGGCCGATTGATAAAATTTCTAAAATTGACCTGGTAGTATTGAGAATAGCAATATTCGAAATAGTTTTCGGAAAAAGCGTACCTGAGAAAGTAGCAATAGATGAAGCCGTGGAATTGGCCAAGGAGTTCGGAAACGATACATCAAGCAAATTTGTAAATGGTGTATTGGGAAGCGTAGTTTCTACGAAATCAGAAAGTATTACAATAAATTCGTTAATTTAA
PROTEIN sequence
Length: 150
MKAKTDPRHIARKLALCSVFCWLFSDPNHEECMKLSSNLLDLEPGDVDLGLTNKIVEGVTNNLKAIDKIIQKAAPEWPIDKISKIDLVVLRIAIFEIVFGKSVPEKVAIDEAVELAKEFGNDTSSKFVNGVLGSVVSTKSESITINSLI*