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gwa2_scaffold_16269_3

Organism: GWA2_OD1_53_7_partial

partial RP 34 / 55 MC: 9 BSCG 37 / 51 MC: 12 ASCG 9 / 38 MC: 4
Location: comp(1523..2632)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA2_OD1_53_7_partial UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 720
  • Evalue 9.50e-205
sigA; RNA polymerase major sigma-43 factor (sigma-A) KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 307.0
  • Bit_score: 318
  • Evalue 2.20e-84
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 318
  • Evalue 2.00e+00

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Taxonomy

GWA2_OD1_53_7_partial → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGTCTATGGCCAGAATTTTAAAGAAAAAACAGCGCCATCCGGCTAAGCGCCGAACCGGTCCGCCCAAAGCGCGGACGGGTTCAGTTAAGCGCGCGGCCCGGCGTTCCGCTAAAACAGTCCAGATCGACCAGGCCGCGGTCGACCGGCTGATCGCCAAGGGCCGGATGCGCGGTTTTATCACTGAAACGGAAATCCTGTACGCCCTGCCCGATCTGGAAGATTACGTCGAGGGCTATGAGCATTTGTTGGACCAGTTCGAGCACATGGGCGTGGCCGTGATCGAAGCGACCGAGGGCATCCTGACCACCAAAGAGCCGTCCAAGTCAGTCCGGGAAAAAGCCGGGGGCTCCAAGGACGAGCGTCATTTCGACCTGGGCGACATCTCCAACGACTCCATTCAGATGTACCTGCGCGAGATCGGCAAGGTGCCTTTACTGACATCCGAAGAAGAGGTCTCGCTGGCCAAGCGCAAAGAAAAGGGCGAGATGGAAGCCCAGCGCCGTTTGGTCGAAGCCAACCTGCGCCTGGTCGTGTCCATCGCCAAGAAATTCACGGGCCGCTCGCTGTCTTTACTTGATCTAATTCAAGAGGGCAATATAGGTTTGTTCCGAGCGGTCGAGAAATTCGACTACCGCAAAGGCTACAAGTTCTCGACTTATGCCACCTGGTGGATCCGTCAGGCCATTACCCGCGCCCTGGCTGACCAGTCGCGCACCATCCGCATCCCGGTGCACATGGTCGAGACGATTAATAAGTTCCAGCAGGTCGAGCGCCAGCTGATTCAGGACCTGGGCCGCGAGCCCCTGCCCGAGGAAATCGCCGCGGAAATGAGCGAGCCGATCGAAAAAATCCATCAGATCATCAAAATCTCCCAGGACACGGTGTCGCTCGAGACTTCGGTCGGCGAGGATGACGAGGATTCGACCCTGGGCGACTTCATTGAAGATGTGAAGACCATCACGCCCGACCGCGTGGCCGCCATGCAGCTCTTGAAAGATCACGTCCAGGAAATCATCCCGCCAGATCGAAGCCAAAGCCCTGGAAAAAATCCAGTCCCACGCCGGCATGCGGAAGTTAAGGGATTATTAGAACACTCTAATAATCCATAG
PROTEIN sequence
Length: 370
MSMARILKKKQRHPAKRRTGPPKARTGSVKRAARRSAKTVQIDQAAVDRLIAKGRMRGFITETEILYALPDLEDYVEGYEHLLDQFEHMGVAVIEATEGILTTKEPSKSVREKAGGSKDERHFDLGDISNDSIQMYLREIGKVPLLTSEEEVSLAKRKEKGEMEAQRRLVEANLRLVVSIAKKFTGRSLSLLDLIQEGNIGLFRAVEKFDYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKFQQVERQLIQDLGREPLPEEIAAEMSEPIEKIHQIIKISQDTVSLETSVGEDDEDSTLGDFIEDVKTITPDRVAAMQLLKDHVQEIIPPDRSQSPGKNPVPRRHAEVKGLLEHSNNP*