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gwa2_scaffold_22790_13

Organism: GWA2_OD1_53_7_partial

partial RP 34 / 55 MC: 9 BSCG 37 / 51 MC: 12 ASCG 9 / 38 MC: 4
Location: comp(8727..9278)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA2_OD1_53_7_partial UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 362
  • Evalue 4.30e-97
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 137.0
  • Bit_score: 75
  • Evalue 2.10e-11
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 77
  • Evalue 4.00e+00

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Taxonomy

GWA2_OD1_53_7_partial → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGATCCCGGGTAAACCCACAAGGAGCGAACAATGGAAGCTGGAACTCGAACGAGAGTTTTTGGCCGCTTACGATGAACACGCAGATGCGCTTTTCAGGCATTGCTTGCTGCGCGTGCGCGATCGCGAGGCGGCGAAGGATGTTGTGCAGGAAGCGTTTAGTCGCACATGGCTTTACTTATCGGAAGGCAAAGATATCGAATACATGCGCGCCTTTTTGTATCGAGTTGCGAATAATCTGATCGTCGACGCATCGCGCAAAAAGAAATCCAGCTCGCTCGACGCGATGATGGAAAATGACGGATTTGAAGTGGCGGATGAATCCCTGACGCACCCCGACATCATTCCGCAAACGAGAGAGGTGGTAGAGCATCTCAAATCGCTCGATGACATTTATCGCGTCGCGATCACCAAGCGCTTTTTTGAGGAAAAATCGCCGAAGGAAATAGCGGTGGAATTAGGCGTGTCCGAAAACGTCGTATCGGTGCGCATTCACCGCGGCATCGAGCGACTTGGCAGGCTTATGAAGCGCAAACCTTTACAAGCAGCCTAG
PROTEIN sequence
Length: 184
MIPGKPTRSEQWKLELEREFLAAYDEHADALFRHCLLRVRDREAAKDVVQEAFSRTWLYLSEGKDIEYMRAFLYRVANNLIVDASRKKKSSSLDAMMENDGFEVADESLTHPDIIPQTREVVEHLKSLDDIYRVAITKRFFEEKSPKEIAVELGVSENVVSVRIHRGIERLGRLMKRKPLQAA*