ggKbase home page

S4JAR1_27_11

Organism: ARMAN1

partial RP 45 / 55 MC: 18 BSCG 17 / 51 ASCG 0 / 38
Location: 7775..7954

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Rpb6 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI46_9EURY (db=UNIREF evalue=9.0e-20 bit_score=99.0 identity=82.46 coverage=93.3333333333333) similarity UNIREF
DB: UNIREF
  • Identity: 82.46
  • Coverage: 93.33
  • Bit_score: 99
  • Evalue 9.00e-20
DNA-directed RNA polymerase subunit K similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 56.0
  • Bit_score: 83
  • Evalue 1.90e-14
RNA_POL_K_14KD (db=PatternScan db_id=PS01111 from=7 to=21 evalue=0.0 interpro_id=IPR020708 interpro_description=DNA-directed RNA polymerase, 14-18kDa subunit, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 180
ATGCCAATGCAAGAATATACAAAATTTGAAAAaGCAAGAGTGGTTGGAGCAAGGGCGCTCCAGCTTGCGCACGGCGCGCCGCCTCTTATAAAGGTGCCCGAAGGCATAACCGAGCCGCTAGATCTTGCGGAGATAGAATTTGAAAAAGGAGTAATACCCATAACGATAATCAGGGACTGA
PROTEIN sequence
Length: 60
MPMQEYTKFEKARVVGARALQLAHGAPPLIKVPEGITEPLDLAEIEFEKGVIPITIIRD*