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scnpilot_cont_500_p_scaffold_5664_9

Organism: SCNpilot_cont_500_p_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 26 / 38 MC: 22
Location: comp(5107..5790)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYC3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 261
  • Evalue 9.10e-67
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 219.0
  • Bit_score: 261
  • Evalue 1.30e-66
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 214.0
  • Bit_score: 252
  • Evalue 9.10e-65

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCCGTCTCCCCAGACACAACCGAATTCCACCGCCGATGCCGCGCTGGTCGCCCGGATCCGGGCCGGCGACGAGGATGCCGTCCGCGCTCTGGTCCGCCGCAATAACCAGCGGCTGTTCCGCATCGCCCGCAGCATTCTGCGCGACGATGCCGAGGCTGAGGATGCCGTGCAGGAGGCCTATGTCCGCGCCTTCACCCATCTCGACGGCTTCCGTGGGGAGGCCCTGTTGTCCACCTGGTTGACGCGCATCGTCGTCAACGAGGCGCTCGGCCGCTTGCGGTCGCGGCGGCCGACCACGCCGTGGGTGGAAGATGTCGCCACCGATGGTGATGGCCAGGTGGTGCCGTTTCCCCTGATCTCGCCGCAGCCCGATCCGGAGCGTTCCATGGCCCAGCACGAAATCCAGAGCCTTCTCGAACGCGCCATCGATGCGCTGCCCGATCCGTTCCGCGTGGTGCTGGTCGCGCGGGTGCTCGAAGAGATGAGCATCGAGGAAACCGCCGCGCTGTTCGGCCTGCGGCCGGAAACGGTGAAGACGCGGCTGCATCGCGCGCGCGACATGCTTCGACGCGATCTCGAACAGCAGCTTGGGCCGATGCTGGCGCAGAGCTTTCCATTCGCCGGCGCGCGCTGCGAGCGCATGGCTGAAAAAGTTGTCATGCGTCTGCGCGAATTACGCTGA
PROTEIN sequence
Length: 228
MPSPQTQPNSTADAALVARIRAGDEDAVRALVRRNNQRLFRIARSILRDDAEAEDAVQEAYVRAFTHLDGFRGEALLSTWLTRIVVNEALGRLRSRRPTTPWVEDVATDGDGQVVPFPLISPQPDPERSMAQHEIQSLLERAIDALPDPFRVVLVARVLEEMSIEETAALFGLRPETVKTRLHRARDMLRRDLEQQLGPMLAQSFPFAGARCERMAEKVVMRLRELR*