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scnpilot_cont_500_p_scaffold_5242_2

Organism: SCNpilot_cont_500_p_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 26 / 38 MC: 22
Location: comp(621..1877)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LH30_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 415.0
  • Bit_score: 730
  • Evalue 7.40e-208
  • rbh
RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 415.0
  • Bit_score: 730
  • Evalue 2.10e-208
  • rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AGB70532.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 415.0
  • Bit_score: 730
  • Evalue 1.00e-207

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
TTGACGCCCGTGTCGCTGAACCGGACCATCGACGGCATCTATCGCAGCCACTCGCGTCGCGTGCTGGCAACGCTGATCCGCCTGCTCGGAGATTTCGACCGGGCGGAGGAAGCACTTCACGACGCCTTTGCGGCAGCGGCGCAGCAATGGACTGACGAGACGATCCCGGCCAATCCCTACGCCTGGCTCGTCTCCGCCGGCCGCTTTCGCGCCATCGATCATATCCGCCGGCGAACGCGCTTCGATGCAGCCCAGGCCGATATCGCCGACAGCCTCTATCCGGAGGGCGAAACAATGGAGACGTCGGACAGCGAAGAGATCGAAGACGACATGCTGCGGCTGATCTTCACCTGCTGCCATCCGCTCGTACCGGCCGAAGCACGCACGGCGATGGCACTTCGGGAGGTCTGCGGGTTGACGACGGAAGAGATCGCTCACGCCTTCCTGATCCCGGCTCCGACCGTCGCCCAGCGCATTGTCCGCGCCAAGAACCGCATTCGTACCGCCCATATTCCCTACGAAGTGCCAGGCAAGCCCGAACTGCCGAAGCGGCTGGCGCAGGTGCTGCATGTCATTTACCTGGTTTTCAACGAGGGCTATTCGGCCTCTTCAGGCTCTGCGATCGTGCGCGCCGATCTTGCGGCGGAAGCCATCCGGCTCGGCAGGCTGTTACTGCAGCTATTGCCGGATTCCGAGGTCGAAGGGCTGCTTGCGATCATGCTGCTGCAGGATTCGCGGCGTCTTGCCCGTATCGACCAATCCGGCGATCTGGTGCTGCTTGCCGATCAGGATCGCGCACTCTGGGATCACGACCAGATCCGCGAAGGACTTACGTTATCGGCAAGCGCCATGGCGGCCGAAAGCGTCGGCGGCTACGCCCTGCAGGCCGCGATCGCAGCCGAACATGCCCGCGCAGCGACTGCCGACGATACCGACTGGCGGCAGCTCGTCACACTCTACGACCTGTTGCTGACGGCGAGCCCTTCCCCGGTAATCGAACTCAATCGAGCCGTGGCCGTCTCCATGTGTGACGGTCCGGCGGCGGCTGTTTCCATCGTCGACCGGCTGCTGCAGGAGGAGCGAATGGCGCGGTATCACCTCACCCATGCGGCAAAAGCGGACTTTCTCCGCCAGCTCGGACGACATGACGAGGCACGGCAATCCTACGAAACGGCATTATCGCTCTGCCAGCAGGGGCCGGAGCAGGCATTCCTGCGCAAGCGCTTGAGCGAACTCGATGAAGCGGCCGAGCGCTAG
PROTEIN sequence
Length: 419
LTPVSLNRTIDGIYRSHSRRVLATLIRLLGDFDRAEEALHDAFAAAAQQWTDETIPANPYAWLVSAGRFRAIDHIRRRTRFDAAQADIADSLYPEGETMETSDSEEIEDDMLRLIFTCCHPLVPAEARTAMALREVCGLTTEEIAHAFLIPAPTVAQRIVRAKNRIRTAHIPYEVPGKPELPKRLAQVLHVIYLVFNEGYSASSGSAIVRADLAAEAIRLGRLLLQLLPDSEVEGLLAIMLLQDSRRLARIDQSGDLVLLADQDRALWDHDQIREGLTLSASAMAAESVGGYALQAAIAAEHARAATADDTDWRQLVTLYDLLLTASPSPVIELNRAVAVSMCDGPAAAVSIVDRLLQEERMARYHLTHAAKADFLRQLGRHDEARQSYETALSLCQQGPEQAFLRKRLSELDEAAER*