ggKbase home page

scnpilot_cont_500_p_scaffold_65205_1

Organism: SCNpilot_cont_500_p_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 26 / 38 MC: 22
Location: comp(2..736)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Afipia birgiae RepID=UPI0002EFC3FA similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 245.0
  • Bit_score: 483
  • Evalue 1.20e-133
CP4-like integrase {ECO:0000313|EMBL:EJU15048.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH1 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 245.0
  • Bit_score: 445
  • Evalue 3.90e-122
CP4-like integrase similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 245.0
  • Bit_score: 438
  • Evalue 1.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCTTACCGACGTTGCACTCAAGGCATTGAAACCAAAGGATAAAGCCTACAAGATTACTGATCGCGACGGCATGTACGCGCATGTTTCTCCAGGCGGTAACGTCACCTTCCGGTTGGACTACCGCTTGAATGGTCGCCGAGAGACGGTGCTGCTGGGCAAGTATACGCCCGACGGGCTTTCGTTGGCGCGCGCCCGAGAGAAATGCATCGACGCGCGGCGGGCCGTAAGCGAGGGTCGTTCGCCGGCGATAGAGAAGCAGCGCGAGAAGCGCCGCCTGAAGGAAGCGAAGAGTTTTGGCGAATTCGGGGAGAAGTGGCTCACAGCCGCGCCGATGGCCGATAGCACGCGGGCCATGCGGCGTTCCATCTTCGAGCGAGAGCTTCTGCCGGTCTGGCGCAATCGTCTCCTAACGGAGATCACGCCCGATGACCTTAGAGCCCACTGCGGCAACATCGTTGAACGCGGCGCTCCGGCAACAGCCATCCACGTGAGAGACATCCTGAAGCAGATCTACGGATTCGCGATCCTGCATGGTGAGAAAGTCAGCAACCCCGCTGACGAAGTGGGACCGGCGTCGATCGCCACCTTCGTGCCGAAGGACCGGTCGCTTTCGCCTTCCGAAATTCGAGTGATGCTGAAGCAGCTCGAGCACATCGCCACGCTTCCGACGATCCGCTTGGGAATGCGGCTCTACTTGCTCACGATGGTGCGCAAGAGCGAGCTCCAGGACGCG
PROTEIN sequence
Length: 245
MLTDVALKALKPKDKAYKITDRDGMYAHVSPGGNVTFRLDYRLNGRRETVLLGKYTPDGLSLARAREKCIDARRAVSEGRSPAIEKQREKRRLKEAKSFGEFGEKWLTAAPMADSTRAMRRSIFERELLPVWRNRLLTEITPDDLRAHCGNIVERGAPATAIHVRDILKQIYGFAILHGEKVSNPADEVGPASIATFVPKDRSLSPSEIRVMLKQLEHIATLPTIRLGMRLYLLTMVRKSELQDA