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SCNpilot_cont_500_p_UNK

In projects: SCNPILOT_CONT_500_P
Displaying items 80351-80400 of 81380 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_cont_500_p_scaffold_68585
Species: Nitratireductor pacificus (100%)
1 1234 bp 65.80 2.92 98.95
scnpilot_cont_500_p_scaffold_68841
Species: Polysphondylium pallidum (100%)
1 1231 bp 51.34 2.19 80.91
scnpilot_cont_500_p_scaffold_73121
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1183 bp 39.56 2.79 91.29
scnpilot_cont_500_p_scaffold_73377
Species: Pandoraea sp. SD6-2 (100%)
1 1180 bp 63.98 1.53 88.22
scnpilot_cont_500_p_scaffold_73633
Species: Polysphondylium pallidum (100%)
1 1177 bp 53.44 7.90 33.90
scnpilot_cont_500_p_scaffold_82657
Species: Acanthamoeba castellanii (100%)
1 1320 bp 49.32 4.09 28.86
scnpilot_cont_500_p_scaffold_67681
Species: Sphingobacterium sp. ACCC 05744 (100%)
1 1244 bp 43.73 1.69 92.36
scnpilot_cont_500_p_scaffold_28169 1 2168 bp 51.57 3.04 10.66
scnpilot_cont_500_p_scaffold_86961
Species: Roseiflexus castenholzii (100%)
1 1053 bp 62.87 1.71 100.00
scnpilot_cont_500_p_scaffold_93095 1 1004 bp 52.69 2.39 28.39
scnpilot_cont_500_p_scaffold_41705 1 1698 bp 47.82 2.83 11.48
scnpilot_cont_500_p_scaffold_92119
Species: Cafeteria roenbergensis virus (100%)
1 1011 bp 30.46 1.48 89.61
scnpilot_cont_500_p_scaffold_92375
Species: Nematostella vectensis (100%)
1 1009 bp 48.07 2.97 34.79
scnpilot_cont_500_p_scaffold_92887 1 1005 bp 40.20 2.69 16.72
scnpilot_cont_500_p_scaffold_20825 1 2605 bp 21.34 3.17 8.64
scnpilot_cont_500_p_scaffold_12617
Species: marine sediment metagenome (100%)
1 3614 bp 23.05 4.57 61.59
scnpilot_cont_500_p_scaffold_24177
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 2380 bp 43.24 2.02 99.83
scnpilot_cont_500_p_scaffold_37249
Species: Citrobacter amalonaticus (100%)
1 1827 bp 46.96 3.78 91.63
scnpilot_cont_500_p_scaffold_36577
Species: Acanthamoeba castellanii (100%)
1 1848 bp 51.19 3.49 65.91
scnpilot_cont_500_p_scaffold_35089
Species: Lactobacillus paracasei (100%)
1 1895 bp 59.79 2.85 84.22
scnpilot_cont_500_p_scaffold_46929
Species: Legionella longbeachae (100%)
1 1575 bp 42.16 2.38 99.81
scnpilot_cont_500_p_scaffold_50209 1 2435 bp 44.97 2.34 34.74
scnpilot_cont_500_p_scaffold_57234
Species: Ixodes ricinus (100%)
1 1386 bp 15.87 1.95 27.49
scnpilot_cont_500_p_scaffold_79258
Species: Acanthamoeba castellanii (100%)
1 1119 bp 56.03 1.34 27.35
scnpilot_cont_500_p_scaffold_79770
Species: Microbacterium oleivorans (100%)
1 1115 bp 69.60 1.61 69.69
scnpilot_cont_500_p_scaffold_47026 1 1573 bp 47.62 2.48 84.11
scnpilot_cont_500_p_scaffold_65306 1 1273 bp 58.92 2.83 66.93
scnpilot_cont_500_p_scaffold_51330
Species: Nitrobacter hamburgensis (100%)
1 1488 bp 63.17 2.42 99.80
scnpilot_cont_500_p_scaffold_58378
Species: Petromyzon marinus (100%)
1 1369 bp 55.88 3.62 99.93
scnpilot_cont_500_p_scaffold_58890 1 1361 bp 47.24 3.31 31.52
scnpilot_cont_500_p_scaffold_81146
Species: Sphingobacterium sp. PM2-P1-29 (100%)
1 1102 bp 44.46 2.45 95.28
scnpilot_cont_500_p_scaffold_81658 1 1097 bp 64.63 1.50 87.78
scnpilot_cont_500_p_scaffold_81914
Species: Arthrobacter sp. SPG23 (100%)
1 1095 bp 68.49 2.19 100.00
scnpilot_cont_500_p_scaffold_64682
Species: Legionella longbeachae (100%)
1 1281 bp 39.97 2.22 100.00
scnpilot_cont_500_p_scaffold_64938 1 1278 bp 56.89 1.41 54.23
scnpilot_cont_500_p_scaffold_77194 1 1139 bp 54.43 6.98 64.53
scnpilot_cont_500_p_scaffold_63986 1 1291 bp 57.63 2.44 19.29
scnpilot_cont_500_p_scaffold_72266
Species: Candidatus Caedibacter acanthamoebae (100%)
1 1192 bp 38.17 2.27 99.92
scnpilot_cont_500_p_scaffold_72778
Species: Sphingobacterium sp. ML3W (100%)
1 1186 bp 39.80 3.54 99.92
scnpilot_cont_500_p_scaffold_76290 1 1148 bp 47.91 3.53 21.95
scnpilot_cont_500_p_scaffold_76546
Species: Shinella sp. DD12 (100%)
1 1146 bp 69.20 2.88 99.74
scnpilot_cont_500_p_scaffold_70058 1 1216 bp 46.71 2.10 34.79
scnpilot_cont_500_p_scaffold_70314 1 1213 bp 61.67 11.75 79.14
scnpilot_cont_500_p_scaffold_55362 1 1417 bp 43.47 3.07 41.28
scnpilot_cont_500_p_scaffold_55618 1 1413 bp 53.43 2.87 47.13
scnpilot_cont_500_p_scaffold_49642 1 1519 bp 41.01 2.86 41.47
scnpilot_cont_500_p_scaffold_75690
Species: Spirosoma radiotolerans (100%)
1 1155 bp 40.87 1.56 77.14
scnpilot_cont_500_p_scaffold_44178 1 1639 bp 53.75 5.40 99.94
scnpilot_cont_500_p_scaffold_44690 1 1627 bp 35.59 3.78 99.75
scnpilot_cont_500_p_scaffold_61226 1 1328 bp 46.23 2.37 25.53
Displaying items 80351-80400 of 81380 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.