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gwf2_scaffold_1539_11

Organism: GWF2_OD1_35_39

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(9319..9870)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 366
  • Evalue 1.70e-98
RNA polymerase, sigma-24 subunit, RpoE KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 184.0
  • Bit_score: 117
  • Evalue 3.70e-24
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 117
  • Evalue 4.00e+00

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Taxonomy

RifOxyA12_full_OD1_Moranbacteria_35_19_curated → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGATACTGAAGATAAAAAAATTATTGACGATTTTTTTTCCGGCAACAGTCAAGCTTTTGAAAAACTTCTAAAAAAATATTTGAAGCCGGTTTATAATTTCTTGCGCAATTTTGTGCAAGATCCAGAAATTTTAGACGACCTCACACAAGTTACTTTCATCAAAGCTTGGAAAAATTTAAAAAGTTTTGACCCAGAGAAAAATTTCAAAACTTGGCTTTTTACTATTGCTAAAAATACCGCTTATGATTTTCTCAAAAAGAAAAAGACTCTCCCCTTTTCCAATTTTGAAGATGACGAAGGAAATAATTTTTTAGAAAATATCGCTACCGAAGAAATTCTACCCAATGAACTTTTGGAAAAAGCCGAACAAGAAAAATTGTTTGAAAAAAAACTAAACGAGCTGTCCGCTGATTATCGCACACTTTTATTATTGTGCTACAAAGAAGGTTTTTCGCTCCAAGAAATCTCCGTAATTCTCGCCATTCCTTACAGCACCATCAAAAGCCGGCATCTGCGAGCATTGACTAATTTAAGGAAGATATTGCTTTAA
PROTEIN sequence
Length: 184
MDTEDKKIIDDFFSGNSQAFEKLLKKYLKPVYNFLRNFVQDPEILDDLTQVTFIKAWKNLKSFDPEKNFKTWLFTIAKNTAYDFLKKKKTLPFSNFEDDEGNNFLENIATEEILPNELLEKAEQEKLFEKKLNELSADYRTLLLLCYKEGFSLQEISVILAIPYSTIKSRHLRALTNLRKILL*