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scnpilot_cont_500_p_scaffold_753_19

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(17561..19297)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase n=1 Tax=Pseudomonas fluorescens F113 RepID=G8PWK7_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 539.0
  • Bit_score: 552
  • Evalue 5.00e-154
  • rbh
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 539.0
  • Bit_score: 552
  • Evalue 1.40e-154
Choline dehydrogenase {ECO:0000313|EMBL:AEV62583.1}; TaxID=1114970 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluores similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 539.0
  • Bit_score: 552
  • Evalue 7.00e-154

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGATTTGGATCGGGACAACTGTGTATCAGTCGTTTGCCCCATTCCGCCTCCCTACCTCGTCGTGGGAGCAAGCGGTGAAAAATTTTGATATAATCGTGGTTGGTGCGGGCAGTGCAGGTTGTGCACTGGTTGGCAGACTGCTGCGCACCGGCCATACTCGAGTGCTGCTTATAGAGGCGGGCACACGGGGGTTGAATCGCCGATTGCCGGTTCGCATGCCGGTAGCCTGGCCTTTTGCTTCAATTATGCCTCAATTCGGATGGAGCTATTCGTCTGAGCCCGAGGTCCAAACCGTGGGTCGCCGATTGGACCAGCCGCGCGGTCGCTTGATGGGCGGCACTTCCTCTATCAATGGGATGATGTATTCGCGGGGGCATCGGGCTGACTACGACGGATGGGCGGCTTCGGGGCTCACCGGTTGGTCGTTCGCTGATGTTTTGCCTTACTTTCGACGGTCGGAGAACAACTGGCGCGGCGCTTCTGTATGGCATGGTGGTGACGGGCCGCTGCGTGTTTCCAGTAACCCACCACACCCAGATATCTATTCACATATGATCGCCGCCGGGCGTGAACTCGGCTATGCCGAGAACTCTGATTTTAATGGTCCGACCCAAGAAGGGTTCGGTCTGGCGGACTTCAACGTCGCTTCCGGGCGCAGGGAAAGCGCCGCTACCGCTTATCTTACGGGCTATGAATGGGATGATCGGCTGACAGTGCGTAGTGGCGTGCATGTTACGCGGGTCATCATCAAGAATGGTCGTGCGTGCGGGGTTGAATGGCTGGGGCCAGAAGGGCAGGGGCAAGACCTTGCCAGTGAAGTTGTCCTGTGTGGCGGCAGCTTCAATTCTCCGCAACTTCTGATGCTGTCAGGAATTGGCGATCCGGTTGCCTTGGCTGCACATGGCATCCAAGCCGTAGCGACATTGCCCGGGGTTGGCCGCAATCTGCAGGATCATCCCATGATTACGGCGGCATATAAGGCGCAACAGCCTATCGGATATGAACAGCGGTTGCGGCTGGACAGGTTGTTGGGGGCGGGCGGAAGGTGGTTGTTGGGCAAGGGCGGGTTGCTCTCCGATGCACCCTTGTCTGTGCAGGGATTTGTACGTGCGTTGGCGGACAGTGACCGGCCGGATACCCAACTGCAGATCAGTCATGCCACTCCGAACAGCCGTCCGTGGTTTCCATTTTGGCGGAGCCCATCTCCAGATGTGTTTGGCGTCGCGGCGTTGCAGCTGCGGCCAGAGGGCCGCGGAGATGTGCGTTTGCGTTCGGCCGATCCATTTGATCCGCCGATGATCCGTCTGGGCCTGCTGCAGACCGCACATGACCGGCGGATGGCGGGTGCCATGCTGGCTTTTGTAAGGCAGTTTTTTGCGTCTGACGCAATGAAGGACATCGTTGGGCCAGAGTTGATGCCTGGGCCTAACGTTGCGACTGAAGGGGCTGTGGATGCTGCCCTTGCCTCCTCGATCCTGACGGGTTCTCATCCTGTCGGTACTTGTGCGATGGGCACAGACCCGCGCGAAGCTGTGGTCGACATCCAGTTGCGCGTGTTCGGCGTTGAAGGTCTGCGTGTAGCCGACGCTTCGGTAATGCCGACAATCATCAGTGGCAATACCAGTGCTCCGGCGATGATGATCGGGGAGCGCGCTGCCGATTTCATTTTGGGGACGACGCTGCCGCCCGATCAGCCATTTGCCGTTCTCCCTACTATCTCCGAGGAACTTGTCTGA
PROTEIN sequence
Length: 579
MIWIGTTVYQSFAPFRLPTSSWEQAVKNFDIIVVGAGSAGCALVGRLLRTGHTRVLLIEAGTRGLNRRLPVRMPVAWPFASIMPQFGWSYSSEPEVQTVGRRLDQPRGRLMGGTSSINGMMYSRGHRADYDGWAASGLTGWSFADVLPYFRRSENNWRGASVWHGGDGPLRVSSNPPHPDIYSHMIAAGRELGYAENSDFNGPTQEGFGLADFNVASGRRESAATAYLTGYEWDDRLTVRSGVHVTRVIIKNGRACGVEWLGPEGQGQDLASEVVLCGGSFNSPQLLMLSGIGDPVALAAHGIQAVATLPGVGRNLQDHPMITAAYKAQQPIGYEQRLRLDRLLGAGGRWLLGKGGLLSDAPLSVQGFVRALADSDRPDTQLQISHATPNSRPWFPFWRSPSPDVFGVAALQLRPEGRGDVRLRSADPFDPPMIRLGLLQTAHDRRMAGAMLAFVRQFFASDAMKDIVGPELMPGPNVATEGAVDAALASSILTGSHPVGTCAMGTDPREAVVDIQLRVFGVEGLRVADASVMPTIISGNTSAPAMMIGERAADFILGTTLPPDQPFAVLPTISEELV*