ggKbase home page

scnpilot_cont_500_p_scaffold_753_20

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 19436..20323

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031CFAAA similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 286.0
  • Bit_score: 147
  • Evalue 1.90e-32
Putative transcriptional regulator protein, LysR family {ECO:0000313|EMBL:EGE56561.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 298.0
  • Bit_score: 100
  • Evalue 3.70e-18
LysR family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 293.0
  • Bit_score: 99
  • Evalue 1.30e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGTGACATTTCGCCAATTGGAAATTTTTGTCAGCGTGGTGAAGCATGGCAGCTTTCGCCGCTGCGCTGAGGCGCTCGGCGTTTCACAAGTTTCTATTAGCGATCATATGAAAGCCTTGGAAAGCCAACTGGGCACCCAACTGTTTTTACGGACCAAGGGCGGACCGGTAGAATTGACCGAAGCGGGGCGGCGTTCAGCCGTCCTTGCGCCTGAACTTCTGGTGCATCTGCACGACTTCGTTCACAATGTTGCCGTGCCCAACGAACATGGCGGCATCATTCGCATTGCTCTTCACGCGTTCATGATGCGAAATCTGGGTCCCCTCAGAGAACTCTGGACCGAAACCGAGCCTTCAGTGCTGGATCTGCGCAGTGACGACAGGGAGGCCCTCTCACTTTTCAATGCTTTGAGCAGTGGAGAATTCGATGTTGCTTTCTTCTATGCCAACGGCCCGAGTGACTTTTTTAGTGAAGTTGCGGGGTATGAGCCTCTAAGTATCTTTGTTCATGAAGATCACCCTTTAACGCGCCTGGATCGTGTCACACCCGAGATGCTTTCGCGCACGCCCTCGGTAAGCCTGAGCCGAGATATGCCCCTTCGGCACCTGATCGATTCCGCACTGTTGCATGCAGAGGTCCAACCGGTTCGCCATGCTGTAGAGACCGACAATTTTGGGCTGATACTGAGCAGCCTTTACAGGGGTATGGGCTTTACATGTATGTTCCATGCATCGCGCGACGAAATCACCCAAACTAACGGGCTTGTCGAGCTACCGTTTTGCGGAAATTTGCCGAGTCTTGAAATTCGATACACAATTCGTCGCGGACAGAGGTCTAACCCGATCATACTTCAGGCAATAAAACACATCAGGAATTCAATTTTTTAG
PROTEIN sequence
Length: 296
MVTFRQLEIFVSVVKHGSFRRCAEALGVSQVSISDHMKALESQLGTQLFLRTKGGPVELTEAGRRSAVLAPELLVHLHDFVHNVAVPNEHGGIIRIALHAFMMRNLGPLRELWTETEPSVLDLRSDDREALSLFNALSSGEFDVAFFYANGPSDFFSEVAGYEPLSIFVHEDHPLTRLDRVTPEMLSRTPSVSLSRDMPLRHLIDSALLHAEVQPVRHAVETDNFGLILSSLYRGMGFTCMFHASRDEITQTNGLVELPFCGNLPSLEIRYTIRRGQRSNPIILQAIKHIRNSIF*