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scnpilot_cont_500_p_scaffold_160_11

Organism: SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9.0

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(10586..14896)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2622
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=RPOC_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2622
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 999.99
  • Bit_score: 2622
  • Evalue 0.0

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4311
ATGTTAGCCAGAAAAGACACAAGAATTAAATCAGATTTTTCCGAGATCATTATCAGTCTTGCTTCTCCCGAATCAATTCTAGAAAGATCTCGTGGAGAAGTTACACAACCAGAGACTATTAACTACAGGACTTATAAGCCTGAGATGAAGGGTTTATTTTGTGAAAGAATATTTGGTCCTGTAAAAGATTGGGAGTGTCACTGCGGGAAGTACAAAAGAATTAGATACAAAGGCATCATATGCGACCGATGTGGTGTAGAAGTAACGGAGAAGAAAGTCAGAAGAGAAAGGACAGGCCATATTGAACTAGTTATACCTGTAGCTCATACCTGGTATTTTAGGTCGTTACCAAGTAAGATCGGTAATCTGCTTGGACTTCCTACCAAAAAACTGGATCAAATTATTTATTATGAAAGATATGTAGTTGTACAAGCAGGGATTAAGGCAGACGAAGGACTTAGCTACATGGACTTTCTCACAGAAGAAGAATATCTGAATATTATAGACATTCTTCCTCGTGAAAATCAGTTGTTAGATGATAATGATCCTAATAAATTTATTGCTAAGATGGGTGCCGAAGCGTTGGAGTTTATCTTATCACGCATAGACCTAGACACCTTATCTATCGAATTACGTGAACAGGCACATACCGACACTTCTCAACAGCGTAGGGTAGAGGCTCTGAAACGTTTAAAAGTAGTAGAAGCTTTTAGAGATGCTAAAACTCGGATCGCTAACAAGCCTGAGTGGATGATCATGCGTATCATACCCGTTATCCCTCCAGATCTTCGTCCGCTTGTGCCGCTTGATGGCGGTAAGTTCGCTACCTCAGATTTAAATGATCTGTATAGAAGAGTTATTATCCGAAATAATAGGTTAAAACGGCTGATAGATATTAAAGCCCCTGAAGTTATCTTAAGAAATGAAAAAAGAATGCTTCAGGAAGCTGTGGACTCTCTATTTGACAATTCTAGAAAAATAAATACGGTTGTTGCCGAAGGCTCTAGGGTGTTGAAATCATTCAGTGACATACTCAAAGGAAAACAAGGTCGTTTCCGTCAAAACTTGCTAGGAAAACGTGTCGACTATTCGGGTAGGTCTGTAATTGTAGTAGGTCCTGAACTGAAATTACATGAATGTGGATTGCCCAAAGATATGGCTGCTGAGCTATTCAAACCATTTATTATTAGGCGACTTATTGAAAGGGGTATTGTTAAAACTGTAAAATCAGCAAAAAAACTAGTTGAGAAAAAGACGCCTGTCGTATGGGATATCTTAGAAAATGTTTTAAAAGGACACCCTGTACTACTGAACCGCGCCCCAACATTACACAGGCTTAGTATTCAAGCTTTCCAACCTAAGTTAATCGAAGGTAAAGCGATACAGCTCCATCCTTTAGTTTGTGCTGCATTTAATGCGGACTTTGATGGAGACCAGATGGCAGTGCACGTTCCTTTGAGTCACGAAGCTATTGCAGAAGCATCTATCATTATGTTGGCTTCTCATAATATTCTTAACTCTGCTAATGGAACTCCTCTTGCCGTGCCTACCAAAGACATGATCTTAGGACTGTACTATCTCACAAAAGGTAAAAAGGGCACTCCAGACGCTCCTGTTAAAGGAGAAGGAATGACTTTCTATTCTCCAGAGGAAGTAATAATTGGCATTGAAAATGATGAGGTTTCTATCCATGCATTGATTAAAGTTAGAATCAAAGAAAGAGATAAAAATGGTGAAATGGTTCATCACATCATCGAAACGATAGCCGGTAGGGTAGTTTTCAATCAGTACGTTCCAGAAGAATTAGGATTTATTAATGAACTACTTAATAGCAAAAAATTACAACACATTACTAGTCAGGTTTATAGATTAGTTGGTACTTCACGAGCTACTCAATTTTTGGATGATGTAAAAGCACTAGGGTTCCAGTATGCTTATAAAAGTGGAGTAAGTTTTGCTTTAGATGATATTAAAGTCCCTCATATTAAGTTTGAACTGATAGAACAAGCTCAAAAAGATGTAAATGCTGTACAAGAAAACTATTTGATGGGTCTTATCACTGACAATGAGCGATATAACCAGATCATCGATATATGGACGCGCGTCAATACGCAAGTTACGGTATTCTTGATGCAAGAGCTAGAAGAAGATAGGCAAGGGTTCAATTCTATATTTATGATGATGAACTCCGGAGCTAGAGGTTCTAGAGAGCAGGTTCGTCAGCTAGGTGGGATGCGTGGTCTGATGGGTAAACCTCAGAAACAACTACAAGGATCTGTAGGAGAAATCATAGAAAACCCAATTCTTTCTAACTTTAAAGAAGGGTTGGATGTACTTGAATATTTTATCTCTACACACGGAGCTAGGAAGGGTCTTGCCGATACAGCTCTTAAAACAGCAGATGCTGGTTATTTGACAAGAAGACTAGTAGATGTGGCACAAGATGTAATCACGACAGAAGAAGATTGCGGTACATTACGTGGCGTTACGATTACTACTTCAATAAATAAAGATGAAGTAGCCGAATCTATCTCTGAACGAATATTAGGCAGGGTGGCTCTAAACGATATTTATTATCCCAATACGAATAAATTACTGATTAGTGCAGGAGAAGAGTTTAATGAAGAAATAGCTGCTTCTATTGAAACAGCAGGCATTGAAAGTGTTGAAGTAAGGTCGGTGCTAACCTGTGAGACTAGAAGAGGTATATGTACAAAATGCTATGGTAGGAACTTGGCTACTGGAAAACTTGTACAAATAGGAGAAGCGGTAGGAGTTATAGCTGCACAGTCTATTGGTGAACCTGGTACGCAGCTTACATTGAGAACATTCCACGTGGGTGGTGCTGCAGCTAGCGTAGCCGTTGAGTCTAATATACAAGCTACAGATAAGGGCATTGTAAGTTTTGAAGATTTTAATACAATTAAAACTACCAACTCCCAAGGAGAAAAAATAGATGTAATTATCAGTAGGTCTTGTGAAGTTAGGTTGTTAGATCCACAGGATAATAGAATACTCATGCATAAGCACGTGCCCTACAGTGCGTTCTTACGTGTCAAACAAGGTGAGCTTGTAGAGAAAGGGCAAGAGATATGCTATTGGGATCCATATAACGCAGTGATCTTAACAAGTATAGATGGAACCATTGAGTTTCATTCTATAGAAGAAGGCGTTACCTACAAAGAAGAATATGATGAGCAAACAGGGTATAAAGAAAAAGTGATTATCGAATCCAAAGATAAGACTAAAAACCCTAGTATAACTGTCAAAAGTACTTCTGGAGAATCTATTAACTATAACATACCTGTAAAAGCGCGCTTAATAGTAGAAGATGGTAGTAAAATCAAAGCAGGGCATCCGCTTGTAAAAATACCAAGAGTAGTTAGCTTATCTAAAGACATTACAGGAGGATTACCAAGGGTGACAGAACTCTTTGAAGCCAGAGACCCATCGAACCCTTCTATCGTAAGTGAAATAGATGGCTTTGTTACATATGGACCTATAAAAAGAGGTAGTCGTGAGATTTTTGTTGAGTCAAAAGATGGTATAAAAAGAAAGTATTTAGTACCCCTTTCAAAACATATACTTGTGCAGGATAATGACTATATCAAAGCAGGCTATCCTATTTCTGATGGTAATATTTCGCCGAGTAGCATCTTAAATATCAAAGGGCCTGTGGCAGTACAAGAGTATATTGCAAAAGAATTACAAGCTGTGTATCGCCTACAAGGTGTTAAAATCAATGATAAACACATTGAAGTTATTGTCAGGCAGATGCTCAGTAAGTTAGAAGTAATAGAATCAGGGGATACCACTTTCTTGCCTGGACAGACTATCAGCAAGTTTGTCTTTAGAGAAGACAATGATAAACTGTTAGATAAAAAAGTGGTAACTGATGCAGGTGATTCTAAGCTATTCAGAGTGGGTCAGATTATCACTGCCAGAATGCTGGATGATGAAAATGCTAACTTAAAACGACATAATTTGTCACTTATACAGGCTAGAGATGCTGAACCAGCTATTGCTCGGCTAAAATTGCAAGGGATTACACAAGCTTCCTTAGATACAAAAAGCTTTATATCAGCCGCCTCATTCCAAGATACTACGAGGGTGTTGAGTGAAGCTGCAATAAGAGGTAAGCGAGATCGGTTACAAGGGCTAAAAGAAAATGTTATTGTAGGCCATTTAATCCCTACAGGTACTGGTTTACCACGTTATAACAAATTGATTGTTGGGCTTAAGGAGGATTATGATAACCTAATGGCATCTAGGGAAAAAACGATGCCTATGGAAAATATTGCCCAGGCTTAA
PROTEIN sequence
Length: 1437
MLARKDTRIKSDFSEIIISLASPESILERSRGEVTQPETINYRTYKPEMKGLFCERIFGPVKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERTGHIELVIPVAHTWYFRSLPSKIGNLLGLPTKKLDQIIYYERYVVVQAGIKADEGLSYMDFLTEEEYLNIIDILPRENQLLDDNDPNKFIAKMGAEALEFILSRIDLDTLSIELREQAHTDTSQQRRVEALKRLKVVEAFRDAKTRIANKPEWMIMRIIPVIPPDLRPLVPLDGGKFATSDLNDLYRRVIIRNNRLKRLIDIKAPEVILRNEKRMLQEAVDSLFDNSRKINTVVAEGSRVLKSFSDILKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRRLIERGIVKTVKSAKKLVEKKTPVVWDILENVLKGHPVLLNRAPTLHRLSIQAFQPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSHEAIAEASIIMLASHNILNSANGTPLAVPTKDMILGLYYLTKGKKGTPDAPVKGEGMTFYSPEEVIIGIENDEVSIHALIKVRIKERDKNGEMVHHIIETIAGRVVFNQYVPEELGFINELLNSKKLQHITSQVYRLVGTSRATQFLDDVKALGFQYAYKSGVSFALDDIKVPHIKFELIEQAQKDVNAVQENYLMGLITDNERYNQIIDIWTRVNTQVTVFLMQELEEDRQGFNSIFMMMNSGARGSREQVRQLGGMRGLMGKPQKQLQGSVGEIIENPILSNFKEGLDVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVITTEEDCGTLRGVTITTSINKDEVAESISERILGRVALNDIYYPNTNKLLISAGEEFNEEIAASIETAGIESVEVRSVLTCETRRGICTKCYGRNLATGKLVQIGEAVGVIAAQSIGEPGTQLTLRTFHVGGAAASVAVESNIQATDKGIVSFEDFNTIKTTNSQGEKIDVIISRSCEVRLLDPQDNRILMHKHVPYSAFLRVKQGELVEKGQEICYWDPYNAVILTSIDGTIEFHSIEEGVTYKEEYDEQTGYKEKVIIESKDKTKNPSITVKSTSGESINYNIPVKARLIVEDGSKIKAGHPLVKIPRVVSLSKDITGGLPRVTELFEARDPSNPSIVSEIDGFVTYGPIKRGSREIFVESKDGIKRKYLVPLSKHILVQDNDYIKAGYPISDGNISPSSILNIKGPVAVQEYIAKELQAVYRLQGVKINDKHIEVIVRQMLSKLEVIESGDTTFLPGQTISKFVFREDNDKLLDKKVVTDAGDSKLFRVGQIITARMLDDENANLKRHNLSLIQARDAEPAIARLKLQGITQASLDTKSFISAASFQDTTRVLSEAAIRGKRDRLQGLKENVIVGHLIPTGTGLPRYNKLIVGLKEDYDNLMASREKTMPMENIAQA*