ggKbase home page

scnpilot_cont_500_p_scaffold_15

Search features with annotation key words

Displaying items 61-90 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_15_61
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70634..72292
DNA (1659bp) protein (553aa)
Bll1129 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VB8_BRADU rbh
Putative FAD-binding dehydrogenase {ECO:0000313|EMBL:BAR56435.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
FAD-binding dehydrogenase
scnpilot_cont_500_p_scaffold_15_62
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72480..72845
DNA (366bp) protein (122aa)
SnoaL-like polyketide cyclase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLT1_9BRAD
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:EIG60737.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
hypothetical protein
scnpilot_cont_500_p_scaffold_15_63
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72876..74042)
DNA (1167bp) protein (389aa)
oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035C641D rbh
NADH:flavin oxidoreductase / NADH oxidase {ECO:0000313|EMBL:KJC57555.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
NADH:flavin oxidoreductase
scnpilot_cont_500_p_scaffold_15_64
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74095..74679)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61116.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
scnpilot_cont_500_p_scaffold_15_65
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74953..75795
DNA (843bp) protein (281aa)
Putative transcriptional regulatory protein, AraC family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUG1_9BRAD rbh
Putative transcriptional regulatory protein, AraC family {ECO:0000313|EMBL:CCE10099.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizob
transcriptional regulator, AraC family
scnpilot_cont_500_p_scaffold_15_66
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75846..76205
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0V0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34359.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
glyoxalase-like domain-containing protein
scnpilot_cont_500_p_scaffold_15_67
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76407..76805
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030DB4BD
Uncharacterized protein {ECO:0000313|EMBL:CCE10101.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_15_68
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76816..78249)
DNA (1434bp) protein (478aa)
cation transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036D0629 rbh
Cation transporter {ECO:0000313|EMBL:KIZ48164.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palust
multi anti extrusion protein MatE
scnpilot_cont_500_p_scaffold_15_69
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78394..79446)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WAZ3_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46772.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_cont_500_p_scaffold_15_70
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79727..80833)
DNA (1107bp) protein (369aa)
2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
dCTP deaminase {ECO:0000313|EMBL:ABE61118.1}; EC=3.5.4.13 {ECO:0000313|EMBL:ABE61118.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobact
dCTP deaminase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRM9_NITHX rbh
scnpilot_cont_500_p_scaffold_15_71
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81091..82290
DNA (1200bp) protein (400aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
O-succinylhomoserine sulfhydrylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3W6_9BRAD rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EKS34365.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae
scnpilot_cont_500_p_scaffold_15_72
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82314..83153
DNA (840bp) protein (280aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NYV2_9BRAD rbh
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EKS34366.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
Phenazine biosynthesis protein PhzF
scnpilot_cont_500_p_scaffold_15_73
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83327..84532
DNA (1206bp) protein (402aa)
Putative ABC branched-chain amino transporter, periplasmic binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKB5_XANP2 rbh
putative ABC branched-chain amino transporter, periplasmic binding protein
Putative ABC branched-chain amino transporter, periplasmic binding protein {ECO:0000313|EMBL:ABS68458.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
scnpilot_cont_500_p_scaffold_15_74
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84722..85684)
DNA (963bp) protein (321aa)
Lysophospholipase L1-like esterase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YRH2_9BRAD rbh
GDSL family lipase {ECO:0000313|EMBL:KJC43400.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTS
GDSL family lipase
scnpilot_cont_500_p_scaffold_15_75
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85685..86443)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S8T1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD90608.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_15_76
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86440..87702)
DNA (1263bp) protein (421aa)
Putative OpgC protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WQ2_RHOPB rbh
putative OpgC protein
Putative OpgC protein {ECO:0000313|EMBL:ABD90434.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source=
scnpilot_cont_500_p_scaffold_15_77
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88041..88430
DNA (390bp) protein (130aa)
Protein ApaG n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJJ8_9BRAD
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" s
apaG; ApaG protein
scnpilot_cont_500_p_scaffold_15_78
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88552..89529)
DNA (978bp) protein (326aa)
Possible heat shock protein HSP33 n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N0J1_RHOPA rbh
hslO; heat shock protein 33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
scnpilot_cont_500_p_scaffold_15_79
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89637..90035)
DNA (399bp) protein (133aa)
UPI0003CF1316 related cluster n=1 Tax=unknown RepID=UPI0003CF1316
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:CDX23304.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
3-demethylubiquinone-9 3-methyltransferase
scnpilot_cont_500_p_scaffold_15_80
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90055..90978)
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037DD5A2 rbh
scnpilot_cont_500_p_scaffold_15_81
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90975..92186)
DNA (1212bp) protein (404aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=551947 species="Bacteria; Prot
argD; acetylornithine transaminase protein (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0U0M6_9BRAD rbh
scnpilot_cont_500_p_scaffold_15_82
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92723..93229
DNA (507bp) protein (169aa)
Global cell cycle regulator GcrA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG8_NITHX
GcrA cell cycle regulator
Global cell cycle regulator GcrA {ECO:0000313|EMBL:ABE61529.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter
scnpilot_cont_500_p_scaffold_15_83
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93328..94140
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YE22_MESOW
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEH90186.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium op
scnpilot_cont_500_p_scaffold_15_84
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94362..95063)
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20WP6_RHOPB rbh
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD90440.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodops
scnpilot_cont_500_p_scaffold_15_85
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95077..95790)
DNA (714bp) protein (238aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CQ9_RHOPS rbh
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodops
scnpilot_cont_500_p_scaffold_15_86

Not on your lists

comp(95981..96799)
DNA (819bp) protein (273aa)
Putative phosphate ABC transporter ATPase subunit n=1 Tax=uncultured prokaryote AT5 RepID=D3W8H4_9ZZZZ rbh
Putative phosphate ABC transporter ATPase subunit {ECO:0000313|EMBL:ACX33923.1}; TaxID=672203 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote AT5.;"
pstB; phosphate transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_15_87
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96796..97641)
DNA (846bp) protein (282aa)
phosphate transporter permease subunit PtsA n=1 Tax=Methylocystis parvus RepID=UPI0002F28D57 rbh
Phosphate transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX34605.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
phosphate ABC transporter, permease protein PstA
scnpilot_cont_500_p_scaffold_15_88
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97641..98633)
DNA (993bp) protein (331aa)
Phosphate transport system permease protein PstC n=1 Tax=Rhodovulum sp. PH10 RepID=J6LCH6_9RHOB rbh
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:EJW10963.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" s
phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_15_89
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98805..99863)
DNA (1059bp) protein (353aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Methyloferula stellata RepID=UPI00036A2A1D rbh
pstS; phosphate ABC transporter substrate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
scnpilot_cont_500_p_scaffold_15_90
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100075..101418)
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nit
Histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQH5_NITHX rbh
histidine kinase
Displaying items 61-90 of 292 in total

View Taxonomy