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scnpilot_cont_500_p_scaffold_5346_1

Organism: SCNPILOT_CONT_500_P_Aeromonadales_61_5.9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 2
Location: comp(2..367)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Aeromonas caviae RepID=UPI0002197E9F similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 122.0
  • Bit_score: 250
  • Evalue 6.60e-64
RNA polymerase sigma factor {ECO:0000313|EMBL:KDV04018.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 122.0
  • Bit_score: 250
  • Evalue 9.30e-64
sigY; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 122.0
  • Bit_score: 236
  • Evalue 4.70e-60

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Taxonomy

Aeromonas sp. HZM → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGACAACCCAGACGGCGACCTCACATCTTTGCTGGTCCGGGTGGCCGAGCGTGCCGACAAGGCTGCCTTCGCCACCCTGTTCCACCACTTCGCGCCGCGCATCCGCAGCTACGGGCTGCGCCACCTCGGCAGCGAGGCCAACGCCATGGAACTGGTGCAGGAGACCATGCTGCTGGTCTGGCAGAAGGCACGGCTCTATCACCCCGACAAGGGCGCCGCCACCACCTGGATCTACACAGTGATGCGCAACCAGAGCTTTGACATGCTGCGCCGCCGCCGCGCCAGCAAGGAGGAGCTCTGCGCCGAGGAGATCTGGCCGCTGCTGGAATTCCGGGCCGAAGAGGAGCACCTGAGCGGCGGTGAA
PROTEIN sequence
Length: 122
MDNPDGDLTSLLVRVAERADKAAFATLFHHFAPRIRSYGLRHLGSEANAMELVQETMLLVWQKARLYHPDKGAATTWIYTVMRNQSFDMLRRRRASKEELCAEEIWPLLEFRAEEEHLSGGE